Coregonus clupeaformis (lake whitefish): 121538822
Help
Entry
121538822 CDS
T08357
Name
(RefSeq) tumor necrosis factor alpha-induced protein 2 isoform X1
KO
K19989
tumor necrosis factor alpha-induced protein 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121538822
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
121538822
BRITE hierarchy
Motif
Pfam:
Sec6
CNOT11
Sema
SOAR
Motif
Other DBs
NCBI-GeneID:
121538822
NCBI-ProteinID:
XP_041702927
LinkDB
All DBs
Position
25:4620831..4634634
Genome browser
AA seq
670 aa
AA seq
DB search
MELFRGLRDEAVMWTLGTRNPVSGTGSTKPDSPVEHSGKTTSAGRKFKRLKFLRRNSKSN
TNITAPDVHNTSSVITAPLEEVLTFEQNLERNRLSAAGQQLIEREEHLYGQISEEVVQST
TEREKEEKEQLTRDHKALLSHIDLAVKSSLSPDEDSLEALKSAVKAILQEEEQDRRWLNQ
EGKQPAWRPSECRRHHNTVLQSLVEERMDNAELPPEESNKLRSSLQREVCGKGRRLQEDL
LRVVKDVKGCYPEDMDICNLYGKMYHQAFSAGMRKIEEYGLGMEDCSYLLHWVNVAYPEI
LQNPELTKVINPETLGKLLTEELTTPLENQCLTHKETEVQTLINKVLKVEEQAWMDGFVP
ELRDDCYFSPLAIDVIQFINAAVKSVETVLGDTSKVQIIVCLLKDFLNSYKKFQEKVLKG
SNNRNSRTVIMANLACVEQFRDYIVNKADIFPVDVKECCLSIVADMKNIGYTSLTSPIHK
DLKSQYSCLGTPVWLEKKKQVFEMLFEGINKHTQDLKGLTDSCHQMVVQELLSQLHLEVT
VEYVRRLLKRKIKLRDKEMQEQAARLVCEDGQRLHKLFTEAGSREEWLSDILPRIAEVLK
LQDISSIQLEIVTLSQAYPDLSEFQVSALLSLKSNLSASAVKRVKKTLLDNQDTTSSLDA
PPFFSKLQVK
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggagttatttagagggttgagggatgaagcagtgatgtggaccctagggactaggaac
ccagtctcaggaacaggatccactaagccagactctccagtggaacacagtggaaagaca
acatcagctggaagaaagtttaaacgtttaaaattcctaagacggaattccaagagtaac
accaacatcactgctccagatgtccacaacacatccagcgttattactgcccctctcgag
gaggtgttgacctttgagcagaaccttgagagaaatcgcctgtctgctgctggccaacag
ctgattgagagagaggagcatctatatggacagatctcagaagaggtggttcagtcgacc
acagagagggagaaggaggagaaagagcagctcaccagagatcacaaagccctcctcagc
cacatagacctggctgtaaagagttctctcagtccggatgaagacagtctggaggctctg
aagtctgcagtgaaggctatcctacaggaggaggagcaggataggcgatggctgaatcag
gagggtaaacagcctgcctggaggcccagtgagtgtagacgtcaccacaacactgtcctc
cagagcctggtggaggagcgtatggacaatgccgaattgccccctgaagagagcaacaag
ctacgctcctccctgcagagggaggtctgtgggaagggcagacgcctgcaggaggacctg
ctgagggtggtgaaggatgtgaagggctgctacccagaggacatggatatctgcaacctc
tatggaaagatgtatcaccaagccttcagcgcagggatgaggaagattgaagagtatggg
ctgggcatggaggactgctcttacctcctgcattgggtgaatgttgcctacccagaaatt
ctacaaaatccagaactgaccaaggtgattaaccctgaaacgttgggaaagctgttgact
gaggagttgacaacaccactggagaatcaatgtcttactcacaaagagacagaggttcag
acattgatcaacaaagtgctgaaggtggaggagcaagcctggatggatgggtttgtgcct
gagctcagagacgactgttactttagccccttggccatcgacgtaattcagtttattaat
gctgcagtgaaatcagtagagacagttttgggagacacgtccaaagtccagataattgtg
tgcctgttgaaggacttcttgaatagctacaagaaattccaggagaaagttctcaaggga
agcaacaacagaaacagcagaactgtgataatggccaatcttgcctgtgttgaacaattt
agggactatattgtgaacaaagcagacatcttcccagtggatgtaaaggaatgctgtctg
tccatagtagctgatatgaaaaacattggctacacatctttaacaagccctatacacaag
gatctcaagtctcagtacagctgtctggggacacccgtctggttggagaagaagaaacag
gtgtttgagatgctgtttgaaggaattaacaaacacacccaggatcttaagggcttgact
gactcctgtcatcagatggttgtgcaggagctgctgagccagctgcacttggaggtgaca
gtggagtacgtgaggaggctactgaagaggaagatcaagctgagagacaaagagatgcag
gagcaggcggccaggttggtgtgtgaggatggccagagactacacaaactgttcactgaa
gcgggttccagggaggagtggctgagtgacatcctgcccaggattgctgaagtgctgaaa
ctccaagacatttcctccatacagctggagatagtgactctgagtcaagcttaccctgat
ctcagtgaattccaggtgtccgccctgcttagcctcaaatccaacctttctgcctctgcc
gtgaagagggtgaagaagaccctcctggacaaccaggacaccaccagctccctggatgcc
ccaccctttttctccaagttacaggtcaaatga
DBGET
integrated database retrieval system
