Coregonus clupeaformis (lake whitefish): 121540040
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Entry
121540040 CDS
T08357
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121540040
Membrane trafficking [BR:
cclu04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
121540040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
TRAPPC9-Trs120
SNAP
Motif
Other DBs
NCBI-GeneID:
121540040
NCBI-ProteinID:
XP_045063630
LinkDB
All DBs
Position
26:359823..419104
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AA seq
1522 aa
AA seq
DB search
MAQCVQSVQEFIQDSFVPMVAVLCSEDAEKVTRKNNLNFSELLRPFCRLTSEGHMRDPNN
QVQVVKNLRISVNNVVTRPSVPASGIPGHAQRRLLSEVVSTCQPAEGGVSNVITAGDYDL
NISDRSLKASVPWYSDWRDTLTELSTSKHYTATTPWFEAYRESFLQSMPASDHEFLNHYL
ACLLVVSSSEAVPVEKFLKLSQEQHRIQHSGEYTNPKWFIPNTLKYYVLLHDMSQGNEQR
ADSVYEDMKQRYGAQGCYLLKVNSRTAAAGADEQIPDPWSQYLHKSSLQSQDQYEDPAPA
PVVVNNTAVENNVGGTSEVDGHDSEEKDGVLVNSLDNTHPLQLDTPSDTPGSLDALRAVA
VETKPPPIATGMAAAASHGACLTLNDHDRIRLFIQEFTFRGLLPHIEKNIRQLNDQLVSR
KGLSRSLFSATKKWFGGGKVPEKSIAELKNTSGLLYPPEAPELQIRKMADLCFLVQHYEL
AYSCYHTAKKDFLSDQAMLYAAGALEMAAVSAFLQVGAPRPYPAHYMDTAIQTYRDVSKN
MVLAERCALLSAEVLKSQAKYSDAATLLIKMTSEDSDLRSALLLEQAAHCFINMRNPMVR
KFAFHMILAGHRFSKAGQKRHALRCYCQAMQVYKGKGWSLAEDHINFTIGRQSFTLRQPE
NAVSAFRHILTNDSQQTSTQQGAFLREYLYVYKNVTGVCEVALPQLPLPCINSSATRVYF
GHERRLAEGEKQAATHVSLDQEFDRDLAAMWQDLEEQVVAAANRGVVPATFQPTQCCLNS
QTDNLRIPLAVVEEPIIVEVVFRNPLKVPLVLSDLSLLWKFTLKDFNRPQPQEDSVGDAV
AISNEKEAITPRTPQKDDVIATEVIPEFYLSPEETRLARLKLLPHQTGQLNILGLVYNLA
STPSTGDTTINSTAASQSEGPSAAEGTSVRGRQDLEIQGPRLNQTKEEKTSVSHGPDRRL
DPTITPPMPLLEVFFLQFPTALLCGEIRKAYVEFCNVSRVTLCGLRVASTHPDFFTFGST
SLATPLTPLSPTSFENCSAYKTLATPPGATPGSVAAVTLVSAGDFGSGTGLGGGGVSGAG
TGGKWVAEIPLGEGTLKPGESTQLPLWLRGPDQEGVHEINFLFYYESAEKGGKISHRVLR
HTVFICVSRSLSVRATACRSNTLPEEEEEGEEGRNGSMLVFVDVENINSSEAGVREFHIA
QVSSSSKQWRLHKCINPAEDKDCKLTSRERGKLCFRATRCKPLQVTSKAVEKYTFADLSL
GNEQIITSTTPCADFFFRRCQPLESLRLPVAIETQGRHSRSQGAGHGGGAKDITGVVRKC
NEVDLDIIILWKAFVVEDNKQVILEGQLHVALQTIDKEACSLTQKEEAQEMVLLKFKPEL
PPPMTRPSMEQLSHLIKTNLHYPESYSHPFIQKSLCMVPVTLTLSNCSLAKVDVIIDLRH
KTTSPESLEVHGSFTWLGQTQYKLQLRAQEVMRVPLRACFLHAGVYNLGTPRVFAKLADQ
GAMCETSQQTATPALIIIINST
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atggctcagtgcgtacagtcggtgcaggagttcatccaggactcgtttgtcccgatggtg
gcggtcctgtgtagcgaagatgcggagaaagtgactcgtaaaaacaacctgaatttctcg
gagctgctaaggcccttctgccggttaacctccgaaggtcacatgagggaccccaacaac
caggtgcaggtggtgaagaaccttcgtatcagcgtcaacaacgtggtgacacgcccttct
gtccctgcctccggcatccctggccatgcccagcgacggctgctcagcgaggtggtgtcg
acatgccaaccggctgaaggtggcgtttccaatgtcataactgccggcgactatgacctc
aatattagtgatcgctctcttaaagctagcgtcccctggtacagtgactggagggacacg
ctaacggaactcagcacctccaagcattacacagccacgactccctggtttgaggcgtac
agagagagcttcctccagtccatgcctgcctccgaccatgagttcctcaaccactacctc
gcttgtctgttggtggtgtcatccagtgaggctgtaccagtggagaagttcctcaagctg
tctcaggagcagcacaggatccagcacagcggcgaatacaccaaccccaagtggttcatc
cccaacacacttaaatactacgtcctactgcacgacatgagccagggaaacgaacagagg
gctgactctgtgtatgaggatatgaagcagaggtatggtgctcagggttgttacctgttg
aaggtcaactctcgtacggcagcagcaggagcagacgaacagatcccagacccatggagc
cagtaccttcacaagagcagcctgcaaagccaggatcagtatgaggatccagccccagcc
cctgtagtggtgaacaacactgctgtagagaacaacgtaggaggaacatccgaggtggat
ggacacgactcagaagagaaagacggagtcttggtcaacagtctggacaacacccatccc
ctccagctggatacacccagtgacacgcccggtagcctcgacgctctcagggccgtcgcc
gtggaaaccaagccaccgcctatcgccacgggaatggcagcggccgccagccatggggcg
tgcctaacgctgaacgaccacgaccgcatcagactgttcatccaggagtttaccttcagg
ggactactgcctcacatagagaagaacatcagacagctcaatgaccagctggtctccagg
aaaggcttgagtcgctctcttttctctgccactaagaagtggtttggaggagggaaagtt
ccagagaagagtattgctgaactgaagaacacttctggcctcctctatcccccagaagcc
cctgagctgcagatcaggaagatggctgacctgtgttttctggttcagcactatgagctg
gcctacagctgctaccacacggccaagaaggatttcctctctgaccaggccatgctctat
gccgctggggcactggagatggcagcagtgtctgcgtttctacaggttggggctccaagg
ccgtatccagcacactacatggacacggcaatacagacctacagagatgtgtccaagaac
atggtcctagctgaacgttgtgctctgctcagtgctgaggtactaaagagtcaggccaag
tactctgatgctgctaccctcctcatcaagatgaccagtgaggactctgacctgcgttct
gccctcctattggagcaggcagcccactgttttattaacatgcggaaccccatggtcagg
aagtttgccttccacatgatcctggcaggacaccgcttcagcaaggcagggcagaagcgc
catgcgttgcggtgttactgccaggccatgcaggtgtataagggtaaaggctggtccctg
gctgaggaccatatcaacttcactatcggccgccagtccttcaccctgcgccaaccagag
aacgctgtctcagccttcagacacatcctcaccaacgacagccagcaaacctccacacag
cagggagccttcctccgggaatacctctacgtctacaagaatgtgacgggtgtgtgtgag
gtggcgctaccccagctgcccctaccctgcatcaacagctctgccaccagggtctacttc
ggccatgaacgccgcctggcagagggtgagaagcaggcagccacccacgtgtccttggac
caggagtttgaccgggacctagctgccatgtggcaggacctcgaggaacaggtggttgcc
gccgccaaccgtggggtcgtcccggcaacgtttcaacccacccagtgctgcctgaacagt
cagacggacaacctccgcatcccgcttgctgttgtggaggaacccatcatagttgaggtg
gtgttccggaaccctctaaaggttccactggttctctctgacctctcgctgctctggaag
ttcacgctcaaagacttcaatcgaccgcaaccgcaggaagactcggtcggagacgccgtg
gccatcagcaacgagaaggaggccatcactcccaggaccccacagaaagatgacgtcatc
gccacagaagtcatcccagagttctacctgagccctgaggagacgagattggctcgtctg
aaactgctgccccaccagacaggtcaactcaacatcctgggtctggtctataacctggcc
tccaccccctctactggagacactactatcaacagcaccgcagcctcacagagcgaaggt
ccctcagcggcagaggggacgtcagttcgtggtcgacaggacctagagatccagggacca
cggttgaaccagaccaaagaggagaagacctcagtcagccacggtcctgaccgacgtctc
gaccccaccatcacccctcccatgcccctgctagaggtattcttcctccagttccctacc
gccctgctatgtggtgagatcaggaaggcttacgtggagttctgtaacgtgagtcgcgtt
accctgtgtggcctgcgggtggcgtccacgcacccagacttctttacctttggaagcacc
tccttagccacacctctcaccccactcagccccacctcttttgaaaactgctccgcctac
aaaactctggccacaccccctggcgccacgcccgggtccgttgccgcggtgacactggtt
tcagcgggggactttgggtcggggacagggttgggaggaggaggagtgtccggtgcgggt
acggggggtaaatgggtagcagagatccctctaggagaggggacactaaagcctggagaa
tctacccagctgcccctgtggctgagaggaccagaccaggaaggagtccacgagatcaac
ttcctgttctactacgagagcgccgagaagggaggcaagatcagtcacagggtgttgcgt
cacacagtatttatttgtgtgagtcgttcactgtctgttcgggccacagcttgtcgtagt
aacacactgccggaggaggaggaggagggggaggaggggaggaacggcagcatgctggtc
tttgttgacgtggagaacatcaactcaagtgaggctggggtgcgtgagtttcacattgca
caggtctctagcagcagtaagcagtggagactacacaagtgtataaacccagcagaagac
aaagattgcaaactcaccagcagagagaggggaaagctgtgcttcagagcaacacgatgc
aaacccctgcaagttacctcgaaggcagtagagaaatacacctttgcagacctgagcctt
gggaatgaacagatcatcacctccaccactccatgtgcagatttcttcttccggaggtgt
cagcccttggagtctcttagactgcccgttgccatagagacacaggggagacattccagg
agtcaaggggcggggcatgggggcggggccaaggatataacgggcgtagtcaggaagtgc
aacgaggtggacctcgacatcattattctctggaaggcatttgttgttgaggacaacaag
caggtgatcctagagggacagcttcatgtggctctacagaccattgacaaagaggcctgc
tctttgacacagaaagaggaggctcaggagatggtgctgctgaagtttaaaccagagctt
cctcctccaatgacacgaccctctatggaacagctctcccacctcatcaagaccaacctg
cactacccagagagctacagccaccctttcattcagaagagtctctgtatggttccagtc
actttgactctgtctaactgctccctggctaaagttgatgtcatcattgacctacgacac
aaaactaccagccctgagtctctcgaggtgcacggttcgtttacatggctgggccaaacg
caatacaagctgcagttgagggcacaggaagtgatgcgagtgccgctgcgagcctgcttc
ctgcatgcgggcgtctataacctgggaacgccacgggtctttgccaagctggcggaccag
ggagccatgtgtgagaccagccagcagacggccacgccagcactcatcatcatcatcaac
agcacctga
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