Coregonus clupeaformis (lake whitefish): 121540423
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Entry
121540423 CDS
T08357
Name
(RefSeq) paired mesoderm homeobox protein 1 isoform X1
KO
K09329
paired mesoderm homeobox protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121540423
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121540423
BRITE hierarchy
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
121540423
NCBI-ProteinID:
XP_041705214
LinkDB
All DBs
Position
26:16783682..16791960
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AA seq
245 aa
AA seq
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MTSSYAHVMDRQATISNRLESSITSNLENLQAKKNFSVSHLLDLEEAGERVGTQADESVG
EAGRNMLESPGLTSGSDTTQQENEQLNAEEKKKRKQRRNRTTFNSSQLQALERVFERTHY
PDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLASKNASLLKSYSGDVTAVEQP
IVPRPAPRPNDYLSWGSASPYSTMATYPPTCSNPNTSQGMNMANSIANLRLKAKEYSLNQ
VPTVN
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgacttctagctatgcacatgtaatggacaggcaagcaacgatatcaaatcgtttggag
agttcgattacatccaatctggaaaaccttcaagccaaaaagaacttctcggtgagccac
ctgttggacctggaggaggccggggaaagggttgggacccaggctgacgagagtgtcggt
gaggcggggaggaatatgctggagtcccctgggctgaccagtgggagcgacaccactcag
caggagaatgagcagctgaatgcggaggagaagaagaagaggaaacagaggaggaacaga
actacattcaacagcagccagctacaggctctggagagagtgtttgagaggacacactac
cctgacgccttcgtcagagaggacctggcacgcagggtcaacctcacagaggcacgggtg
caggtgtggtttcagaacagaagggcaaagtttcgtcggaatgagcgtgccatgttggcc
agcaagaacgcctcactcctcaagtcctactccggggacgtcacggccgtggagcagccc
atcgtaccccgtcctgccccccgcccaaatgattacctgtcctggggcagtgcctctcct
tacagtaccatggcaacctacccccccacatgctccaaccccaatacatcccagggaatg
aacatggctaacagcatcgccaacctgcggctcaaagccaaggagtacagcttgaaccag
gtgcccacggtcaactga
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