Coregonus clupeaformis (lake whitefish): 121540645
Help
Entry
121540645 CDS
T08357
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121540645
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121540645
BRITE hierarchy
Motif
Pfam:
PRY
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4
Fib_alpha
ZapD
Y1_Tnp
U-box
YscO-like
Spc29
Motif
Other DBs
NCBI-GeneID:
121540645
NCBI-ProteinID:
XP_045073578
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MAQQGVLLDQDQFCCSVCLDLLKEPVTTACGHSYCRETFTPRPNLRKNNMLAEVVEKLKK
TGLQAAPPPALCYAGPGDVACDFCTGTRKQKALMSCLVCLASYCETHLQPHYEFPPLKKH
KLVKATAQLQEKICSHHDKLLEVYCRTDQQCICLLCVMDEHKGHETVSAAAERTEKQRQL
GMSQQKVQQRFQEREKDLKELQQAVECLKRSAQAAVEDSDKIFTELIRSIERRRSEVKEL
IRAQEKAQVSQAEGLLEQLEQEIAELRKRSTELEQLSHTEDHIHFLQSYQSLSGTSVYSD
LPSIVVRPLQYFGDVSKTVSELREKLEDVLKGEWTKISTTVNRVAVVLPPEPKTREQFLQ
YSCQLTLDPNTAGTRLSLSEGNRKVTYTGQVQPYPDHPDRFTNYLMVLCREGLSGRCYWE
VEWSGDWVDTAVSYKDISRTGTDGRFGYNNKSWSLQCYSDGYCFRHNNVETKVSGPQSSR
VGMYLDHKAGTLSFYSVSDTMTLLHRVQTTFTQPLYPGFYLSGTAELVKL
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcaaggagttctgctcgaccaggaccagttctgttgttctgtctgtctggat
ctactgaaggagccggtcactactgcctgtggacacagttactgtagagagaccttcact
ccaaggcctaatctgaggaaaaataacatgttggctgaagtggtggagaaactgaagaag
acaggactccaggctgctccccctcctgctctgtgctatgctggacctggagatgtggcg
tgtgatttctgcactgggaccagaaagcagaaagccctcatgtcctgtctggtgtgtctg
gcctcttactgtgagactcacctccaacctcactatgaatttcctcctttgaagaagcac
aagctggtcaaagccaccgcacaactacaggagaagatctgctctcatcatgacaaactg
ctggaggtttactgtcgtaccgatcagcagtgtatctgtctgctgtgtgtgatggatgaa
cataaaggccatgaaacagtgtcagctgcagcagagaggactgagaaacagaggcagctg
gggatgagtcagcagaaagtccagcagagattccaggagagagagaaggacctgaaggag
ctccaacaggctgtggagtgtctcaagcgctctgcacaggcagcagtggaggacagtgat
aagatctttaccgagctgatccgctccattgagagaaggcgctctgaggtgaaggagctg
atcagagcccaagagaaggctcaagtgagtcaagctgaaggactcctggagcaactggag
caggagatagctgagctgaggaagagaagcactgagctggagcagctctcacacacagag
gatcacatccatttcctccagagttatcagtctctctccggtaccagtgtatattcagac
ttacccagcatcgttgtccgtcctcttcagtactttggagatgtgagtaagactgtgtct
gaactgagagagaaactagaagacgtccttaaaggagaatggaccaagatctccactaca
gtgaatagagtggctgttgtactgcctccagagcccaagaccagagaacagttcttacaa
tattcctgtcagctcacactggacccaaacacagcaggcacacgcctctctctgtctgaa
gggaacagaaaggtgacctatacaggccaagtccaaccatatcctgatcatccagacaga
ttcacaaactacttgatggttctgtgtagagagggtctgtctggacgctgttactgggag
gtggagtggagtggggactgggttgatacagcagtctcatataaagacatcagcagaaca
gggacagatggtagatttggatacaataacaagtcctggagtttacagtgttatagtgat
ggttattgtttcagacacaataatgttgagactaaagtatcaggccctcagtcctccaga
gtaggaatgtacctggatcacaaggcaggtactctgtccttctacagtgtctctgataca
atgaccctcctccacagagtccagaccacattcactcagcccctctatcctgggttttat
ctctctggtactgctgagctggttaaactgtag
DBGET
integrated database retrieval system
