Coregonus clupeaformis (lake whitefish): 121540824
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Entry
121540824 CDS
T08357
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121540824
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121540824
BRITE hierarchy
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
Fib_alpha
zf-RING_6
ZapD
Y1_Tnp
YscO-like
MAP65_ASE1
LMBR1
Spc29
Motif
Other DBs
NCBI-GeneID:
121540824
NCBI-ProteinID:
XP_041705875
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MGESTKMAENQDLFHCSICLDPLKDPVTTACGHSYCMGCIKESWDQDRLKGVYSCPQCRQ
TFTPRPVLKRNIVLAEVVEKLKKTGLQAASPPALCYGGPGDVACDVCTGTRKQKALMSCL
ACLASYCETHLQPHYESPAFKKHKLVKATAQLQEKICSHHDKLLEVYCRTDQQCICYLCT
MDKHKGHDTVSAAADRTEKQRQLGMSQQKVQQRFQEREKELKELQQAVESLKRSAQAAVE
DSDKIFTELIRSIDRKRSEVKELIRAQEKAQVSQAEGLLEQLKQEIAELRKRSTELEQLS
HTEDHIHFLQSYQSLSSTSVSSDLPSIVVRPLQYFGDVSKTVSELREKLEDFLKGEWTKI
STTVNIVDVVLPPEPKTREQFLQYSCQLTLDPNTAHTLLSLSKGNRKVTRTGQVQPYPDH
PDRFTNIYQVLCREGLFGRCYWEVEWSGQCVDTAVSYKDISRTDRGNAFGAFGENNKSWS
LKCSRGGYWFRHNHIVTKVSGPQSSRVGVYLDHKAGTLSFYSVSDTMTLLHRVQTTFTQP
LYPGFYLYNCSAELVKL
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgggagagagcaccaaaatggcagagaatcaggacctgttccattgctccatctgtctg
gatccactgaaggatccggtgactactgcctgtggacacagctactgtatgggctgtatt
aaagaaagttgggatcaggatcgtctgaaaggtgtctacagctgtccccagtgcagacag
acctttaccccaaggcctgttctgaagagaaacatcgtgctggctgaagtggtggagaaa
ctgaagaagacaggactccaggctgcttcccctcctgctctgtgctatggtggacctgga
gatgtggcgtgtgatgtctgcactgggaccagaaagcagaaagccctcatgtcctgtctg
gcatgtctggcctcttactgtgagactcacctccaacctcactatgaatctcctgctttc
aagaagcacaagctggtcaaagccaccgcacaactacaggagaagatctgctctcatcat
gacaaactgctggaggtttactgtcgtaccgatcagcagtgtatctgttatctgtgtaca
atggataaacataaaggccatgatacagtgtcagctgcagcagataggactgagaaacag
aggcagctggggatgagtcagcagaaggtccagcagagattccaggagagagagaaggag
ctgaaggagctccaacaggctgtggagtctctcaagcgctctgcacaggcagcagtggag
gacagtgataagatctttaccgagctgatccgctccattgacagaaagcgctctgaggtg
aaggagctgatcagagcccaagagaaggctcaagtgagtcaagctgaaggactcctggag
caactgaagcaggagatagctgagctgaggaagagaagcactgagctggagcagctctca
cacacagaggatcacatccatttcctccagagttatcagtctctctccagtaccagtgta
tcttcagacttacccagcatcgttgtccgtcctcttcagtactttggagatgtgagtaag
actgtgtctgaactgagagagaaactagaagacttccttaaaggagaatggaccaagatc
tccaccacagtgaatatagtggatgttgtactgcctccagagcccaagaccagagaacag
ttcttacaatattcctgtcagctcacactggacccaaacacagcacacacactcctctct
ctgtctaaaggaaacagaaaggtgacacgtacaggccaagtccaaccatatcctgaccat
ccagacagattcacaaacatctaccaggttctgtgtagagagggtctgtttggacgctgt
tactgggaggtggagtggagtgggcagtgtgttgatacagcagtctcatataaagacatc
agcagaacagatagaggtaatgcatttggtgcgtttggagagaataacaagtcctggagt
ttaaagtgctctagaggtggttattggttcagacacaatcatattgtgactaaagtatca
ggccctcagtcctccagagtaggagtgtacctggatcacaaggcaggtactctgtccttc
tacagtgtctctgatacaatgaccctcctccacagagtccagaccacattcactcagccc
ctatatcctgggttttatctctataattgttctgctgagttggttaaactgtag
DBGET
integrated database retrieval system