KEGG   Coregonus clupeaformis (lake whitefish): 121540824
Entry
121540824         CDS       T08357                                 
Name
(RefSeq) tripartite motif-containing protein 16
  KO
K12006  tripartite motif-containing protein 16
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cclu04121]
    121540824
Ubiquitin system [BR:cclu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    121540824
Motif
Pfam: PRY SPRY zf-RING_UBOX zf-C3HC4_4 zf-B_box zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-RING_5 zf-RING_2 Fib_alpha zf-RING_6 ZapD Y1_Tnp YscO-like MAP65_ASE1 LMBR1 Spc29
Other DBs
NCBI-GeneID: 121540824
NCBI-ProteinID: XP_041705875
LinkDB
Position
Unknown
AA seq 557 aa
MGESTKMAENQDLFHCSICLDPLKDPVTTACGHSYCMGCIKESWDQDRLKGVYSCPQCRQ
TFTPRPVLKRNIVLAEVVEKLKKTGLQAASPPALCYGGPGDVACDVCTGTRKQKALMSCL
ACLASYCETHLQPHYESPAFKKHKLVKATAQLQEKICSHHDKLLEVYCRTDQQCICYLCT
MDKHKGHDTVSAAADRTEKQRQLGMSQQKVQQRFQEREKELKELQQAVESLKRSAQAAVE
DSDKIFTELIRSIDRKRSEVKELIRAQEKAQVSQAEGLLEQLKQEIAELRKRSTELEQLS
HTEDHIHFLQSYQSLSSTSVSSDLPSIVVRPLQYFGDVSKTVSELREKLEDFLKGEWTKI
STTVNIVDVVLPPEPKTREQFLQYSCQLTLDPNTAHTLLSLSKGNRKVTRTGQVQPYPDH
PDRFTNIYQVLCREGLFGRCYWEVEWSGQCVDTAVSYKDISRTDRGNAFGAFGENNKSWS
LKCSRGGYWFRHNHIVTKVSGPQSSRVGVYLDHKAGTLSFYSVSDTMTLLHRVQTTFTQP
LYPGFYLYNCSAELVKL
NT seq 1674 nt   +upstreamnt  +downstreamnt
atgggagagagcaccaaaatggcagagaatcaggacctgttccattgctccatctgtctg
gatccactgaaggatccggtgactactgcctgtggacacagctactgtatgggctgtatt
aaagaaagttgggatcaggatcgtctgaaaggtgtctacagctgtccccagtgcagacag
acctttaccccaaggcctgttctgaagagaaacatcgtgctggctgaagtggtggagaaa
ctgaagaagacaggactccaggctgcttcccctcctgctctgtgctatggtggacctgga
gatgtggcgtgtgatgtctgcactgggaccagaaagcagaaagccctcatgtcctgtctg
gcatgtctggcctcttactgtgagactcacctccaacctcactatgaatctcctgctttc
aagaagcacaagctggtcaaagccaccgcacaactacaggagaagatctgctctcatcat
gacaaactgctggaggtttactgtcgtaccgatcagcagtgtatctgttatctgtgtaca
atggataaacataaaggccatgatacagtgtcagctgcagcagataggactgagaaacag
aggcagctggggatgagtcagcagaaggtccagcagagattccaggagagagagaaggag
ctgaaggagctccaacaggctgtggagtctctcaagcgctctgcacaggcagcagtggag
gacagtgataagatctttaccgagctgatccgctccattgacagaaagcgctctgaggtg
aaggagctgatcagagcccaagagaaggctcaagtgagtcaagctgaaggactcctggag
caactgaagcaggagatagctgagctgaggaagagaagcactgagctggagcagctctca
cacacagaggatcacatccatttcctccagagttatcagtctctctccagtaccagtgta
tcttcagacttacccagcatcgttgtccgtcctcttcagtactttggagatgtgagtaag
actgtgtctgaactgagagagaaactagaagacttccttaaaggagaatggaccaagatc
tccaccacagtgaatatagtggatgttgtactgcctccagagcccaagaccagagaacag
ttcttacaatattcctgtcagctcacactggacccaaacacagcacacacactcctctct
ctgtctaaaggaaacagaaaggtgacacgtacaggccaagtccaaccatatcctgaccat
ccagacagattcacaaacatctaccaggttctgtgtagagagggtctgtttggacgctgt
tactgggaggtggagtggagtgggcagtgtgttgatacagcagtctcatataaagacatc
agcagaacagatagaggtaatgcatttggtgcgtttggagagaataacaagtcctggagt
ttaaagtgctctagaggtggttattggttcagacacaatcatattgtgactaaagtatca
ggccctcagtcctccagagtaggagtgtacctggatcacaaggcaggtactctgtccttc
tacagtgtctctgatacaatgaccctcctccacagagtccagaccacattcactcagccc
ctatatcctgggttttatctctataattgttctgctgagttggttaaactgtag

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