Coregonus clupeaformis (lake whitefish): 121541686
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Entry
121541686 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM32
KO
K10607
tripartite motif-containing protein 32 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121541686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121541686
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121541686
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121541686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_4
Baculo_IE-1
zf-RING_4
Prok-RING_4
zf-RING_11
ArfGap
Motif
Other DBs
NCBI-GeneID:
121541686
NCBI-ProteinID:
XP_041706857
LinkDB
All DBs
Position
27:26385417..26390094
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AA seq
676 aa
AA seq
DB search
MAAALPALDPDLLREVLECPICLETYNQEQLRPKLLQCGHTVCRQCLEKLLASTINGVRC
PFCSRVSRMSSISQLADNLTVLKILDCASSCTTAGALMCKSCRNRLPRQYCLDCGMVLCD
LCKGEGHQQQGHAVQPIRAAAEQRRKDLGGKLASLREAMDHIQKKRAAIDSLAKNMRVKY
RVVQQEYARAELRLQEELGRQRRAFAASMAEVEKLNGQILEEQTYLLNLAEVQVVSRCDY
LTMQVKQSDIALLEEDGGGKDEEELDLRSSLDLPTLIKLQDPELVTTEHPEALDVAQLTT
KPCTVNTDEDEGLLEFGVGAMCKAAGVVGDLYRDIDMVMPVDEAVCASPGSFKSKSMDEG
GPSSPGDARAGSGPQHCQFVKKMGCKGNLPGMFNLPVSICVTPQGEVLVADRGNYRIQIF
NRKGFQREIRRNPSSIDNFVLSFLGADLPNLIPLSIAITPQGLIGVTDNYDNSVKVYTTD
GHCVACHKNQLIKPWGIAAMPSGEFVVSDVEGGKLWCLAVDRNVGVVNYNRLCSAVRPKF
VTCDAAGTVYFTQGLGLNIENRHNEHHLEGGFSIGSVGTDGQLGKQLSHFFSETEDFRCI
TGMCVDANGDLLVTDSGRKEILQFPKEGGFNVLIQEGLTCPVGVAVTQKGQLMVLDCWDH
CVKVYSYLQRRRSSTC
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagctttgccggctctggacccggacctgctccgggaagtcctggagtgcccc
atctgcctggagacttacaaccaggagcagctgcggcccaagctcctgcagtgtggccac
accgtgtgcagacagtgtctggagaagctgctggctagcaccatcaacggcgtgcgctgc
cccttctgcagcagggtctcccgcatgagcagcatctcccagctggccgacaacctcact
gtgctcaagatcctggactgtgccagctcctgcaccaccgccggcgccctcatgtgcaag
tcctgccgcaaccgcctaccccgacagtactgtctagactgcggcatggtgctctgcgac
ctctgcaagggtgagggccaccagcagcagggccacgccgtccagcccatccgggcggcc
gctgagcagcgccggaaggacctgggtggtaagctggcatccctccgcgaagccatggac
cacatccagaagaagagggcagccattgacagtctggcaaagaacatgcgggtgaagtac
cgggtagtgcagcaggagtacgcccgggctgagctgcgtctgcaggaggagctggggcgc
cagcggcgggccttcgctgcctccatggctgaagtggagaagctgaacgggcagatcctg
gaggagcagacatacctgctgaacctggccgaggtgcaggtggtgtcccgctgcgactac
ctcaccatgcaggtgaagcagagtgacatcgccctgctggaggaggatggaggggggaag
gatgaggaggagctggacctaaggagcagcctggacctgcctacgctgatcaagctccag
gaccctgagctggtgactacggagcaccccgaggccctggatgtggcccagctcaccacc
aaaccctgcactgtcaacactgatgaggatgaggggctgctggagtttggggttggtgcc
atgtgcaaagctgcaggggtggtgggggacctgtacagagacattgatatggtaatgcct
gttgatgaggctgtgtgtgcctcaccgggcagctttaagtccaagtccatggacgaaggg
gggccctcctcgcccggtgatgccagggccggctcagggccacagcactgccagtttgta
aaaaagatgggttgcaagggtaacctgccggggatgttcaacctgccagttagcatctgc
gtcaccccacagggtgaggtcctggtggctgaccggggcaactatcgcatccagatcttt
aaccgcaagggcttccagagggagatccgccgcaaccccagcagcatcgacaactttgtc
ctgagcttcctgggcgccgacctgcccaacctcatcccactgtccatcgccatcacgcct
cagggcctcatcggggtcaccgacaactacgacaactcggtcaaggtgtacaccaccgac
ggccactgcgtggcttgccacaagaatcagctgatcaagccctggggcatcgccgccatg
ccctcgggtgaattcgtggtgtctgacgtggagggtggcaagctttggtgcttggcggtg
gaccgcaacgtgggtgtggtcaactacaaccgcctgtgctcggccgtgcggcccaagttc
gtgacgtgcgatgcagcgggcactgtctacttcacccaggggttgggcctgaacattgag
aatcgccacaacgagcaccacctagaggggggcttctccatcggctcggtaggcacggac
ggccagctgggcaagcagctaagccacttcttctctgagactgaggacttccgttgtatc
acgggcatgtgcgtggatgcaaacggggaccttctggtgacggacagcggcaggaaggag
atcctgcagttccccaaagagggcggcttcaacgtgctcatccaggagggactgacgtgc
cctgtgggcgtggccgtcacacagaaaggacagctgatggtgctggactgctgggaccac
tgtgtaaaagtctactcgtacctacagaggagacgctcctctacctgctag
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