Coregonus clupeaformis (lake whitefish): 121542370
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Entry
121542370 CDS
T08357
Name
(RefSeq) hairy/enhancer-of-split related with YRPW motif protein 1
KO
K09091
hairy and enhancer of split related with YRPW motif
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121542370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121542370
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
121542370
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GFIT
Motif
Pfam:
HLH
Hairy_orange
Motif
Other DBs
NCBI-GeneID:
121542370
NCBI-ProteinID:
XP_041707705
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Position
28:12310583..12313416
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AA seq
317 aa
AA seq
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MKRNHNYSCSSDSELDDNIEVEKDSGDENGNLDSPIDLMSPRTTTQTQAKKRRRGIIEKR
RRDRINNSLTDLRRLVPSAFEKQGSSKLEKAEILQITVDHLKMLHAASGQGYFEAHALAK
DYRSLGFRECLSETARYLSIMEGWNSVDPLRVRLVSHLNNYASQRDIHTGLTGHPGQLAW
SSALRTPSAHLPHPLLLPIPQGRTLAPHSTSSPPSSSSSMSSPCSTDAPVTSRLSVTAPS
EPPRVPPNDTLPLGLALPVSASKLSPPPPFLSSLSSLSAFSFSTFPLVSPAALNPAGPST
ALRNQPYRPWGTEVGAF
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaaatcacaattacagctgttcatctgatagcgaacttgatgacaatatagaa
gtggagaaggacagtggtgacgaaaatggaaaccttgactctcccattgacttgatgtca
ccccggacaaccactcaaactcaagccaaaaaacgacgcagaggaattattgagaaacgg
cgacgtgaccgaatcaacaacagcctgactgatctcagaagacttgtgccaagtgcgttt
gagaagcagggatcttcaaaattggaaaaagctgaaattttgcaaattactgtggatcat
ttgaagatgctacacgctgccagcggacaagggtattttgaagcccatgccctggccaag
gactaccgaagcctgggcttcagggagtgcctgtcagagacggcccgctatctaagcatc
atggagggctggaacagtgtcgacccactccgcgtacgcctggtctcccacctcaacaac
tacgcctctcagagagacatccacactggattgactggacaccctggacaactagcctgg
agctccgctttgaggacgccctccgcccacctgccacaccccctcctcttaccaatcccc
cagggacggacactagccccccacagtaccagcagcccgccctcctcctcctcctccatg
tcatccccctgttctactgatgccccagtgacctccagactcagtgtgacggccccctca
gagcctcccagggtgccccccaatgacactctacctctggggctggccctgcccgtctca
gcctccaagctctccccaccaccacccttcctctcctccctctcctccctgtctgccttc
tccttcagtacttttcccctggtgtccccagcagccctcaacccagcaggcccctccaca
gccctgagaaatcagccttacaggccctgggggacagaggtcggggccttctga
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