Coregonus clupeaformis (lake whitefish): 121542907
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Entry
121542907 CDS
T08357
Symbol
rbfox1l
Name
(RefSeq) RNA binding protein fox-1 homolog 1-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121542907 (rbfox1l)
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121542907 (rbfox1l)
BRITE hierarchy
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
121542907
NCBI-ProteinID:
XP_041708448
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All DBs
Position
28:complement(21154450..21166497)
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AA seq
466 aa
AA seq
DB search
MVDSYPSDLLLFLSFTWTFCVFFTWILLSLIRFSCLVFSSPLSIPSFSLSPSFVLPSPHR
SLSPGGFQAMHHALFSYSDSSALRTARLSPGCPMLPQPSTGRPGQEAGSGDPTLPQVYAQ
PPSYPPPGQAPPTPAGRLPPLDYSPAHPNSEYQEHHQLRVYQGPQHEGADTLAANSTDDA
LVPVTSDSQALSVSVSSGGGTGSGSDEEVSGKAQPKRLHVSNIPFRFRDPDLRQMFGQFG
KILDVEIIFNERGSKGFGFVTFESAMEADRAREKLNGTIVEGRKVEVNNATARIVTKKPQ
TPLVNGEVSTPGWKINPVMGAMYAPELYTGEFQCEFSVASFPYPVATPTLAYRGSPLRGR
GRAVYNTIRSAAAATPTAMPAYPGMSPFSVVYQDGLYGAEVYGGYPAAYRVAQSASAATA
TYSDGYGRVYAAATDPYHHSVGPTTAYGVGTMASLYRGGYNRFTPY
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggttgacagttatccttctgacttactgctcttcctctcattcacttggaccttctgt
gttttcttcacttggattctactctctcttattagattttcctgccttgttttttcatct
cctctgagcataccatccttttccctttcaccctcttttgtcctcccatctccccaccgt
tccctctctcctggtggttttcaggctatgcaccatgctctcttctcctacagtgattct
tcagccttacggactgcccgtctatccccagggtgcccaatgttaccccagcctagtaca
gggaggcccggccaggaggccggcagtggtgaccccaccctcccccaggtctatgcccag
cctccctcataccctccaccaggacaagctcctcccacacctgcaggcagacttcctcct
ctagactatagtcccgcccaccccaactcagagtaccaggagcatcaccagctcagagtc
tatcagggcccacaacacgaaggggctgacactctggcagccaatagcacggacgatgcc
ctggttccggtgacctctgactcccaggctctgagcgtgtcagtgtcatcagggggcgga
acaggaagtggtagcgacgaggaggtgtcaggcaaggctcagcccaaacgcctccacgtc
tccaacatccccttccgcttcagagacccagacctcagacagatgtttgggcaatttggc
aagatcctggatgtggagattatctttaatgagagagggtcaaagggctttgggtttgtg
acctttgagagcgcaatggaagcagaccgagcgagggaaaaactgaacggaacgatcgtt
gaggggaggaaggttgaggtgaacaatgctacagccagaatagtcaccaagaagccccaa
acacctcttgtgaatggtgaggtttcaacccctggatggaagatcaaccctgtcatggga
gcgatgtatgcacctgaactctacaccggtgagtttcaatgtgagttttcggttgccagt
ttcccctaccccgtagctactcccaccctggcctatcggggctcaccgctgcgtgggcgg
ggccgggctgtctacaacacaattcgctcagctgctgcagccacacccactgccatgccc
gcctaccctggaatgtctcctttcagtgtggtgtaccaagatggattatatggagctgaa
gtctatggcgggtatcctgcagcgtacagagtcgcccaatcagcatccgctgccacagca
acgtacagtgatggatatggccgagtttatgctgctgcaacggatccctaccaccattca
gtgggacccacgacagcatacggagtcggaacaatggccagtctgtacagaggaggatac
aaccgcttcaccccttactga
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