Coregonus clupeaformis (lake whitefish): 121543228
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Entry
121543228 CDS
T08357
Name
(RefSeq) ATP-dependent translocase ABCB1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121543228
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121543228
04147 Exosome [BR:
cclu04147
]
121543228
04090 CD molecules [BR:
cclu04090
]
121543228
Enzymes [BR:
cclu01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
121543228
Transporters [BR:
cclu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
121543228
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121543228
CD molecules [BR:
cclu04090
]
Proteins
121543228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
Zeta_toxin
Rad17
AAA_16
RsgA_GTPase
AAA_5
G-alpha
AAA_28
AAA_29
AAA_7
AAA_14
RNA_helicase
AAA_30
PRK
ATP-synt_ab
NTPase_1
Abhydrolase_2
Motif
Other DBs
NCBI-GeneID:
121543228
NCBI-ProteinID:
XP_041708910
LinkDB
All DBs
Position
17:1911430..1938623
Genome browser
AA seq
1281 aa
AA seq
DB search
MGKKDEIAVAKAKIEQNGDIGEDKDEGKKGEKEKEPKMPMIGAIALFRFADGWDRLMMVL
GTIMAIVNGTVLPLMCIVFGDMTDGFIRDSIQTQNNFTNITFPVFNTTLGEEMTGHAIYY
SIMGAVVLVAAYMQVAFWTLAAGRQVKRLRKLFFHCIMQQEIGWFDVNETGELNTRLTDD
IYKINEGIGDKVGMLIQSFTTFIAAFIIGFSQGWKLTLVILAVSPVLGFSAFIFSKVLTS
FTSLEQGAYAKAGAVAEEVISSVRTVFAFGGQQKEITRYQKNLEDAMNMGIRKAISANMA
MGFTFLMIYLSYALSFWYGSTLIISGEYTIGTVLTVFFTVLIGAFAMGQTSPNVQAFASA
RGAAHKVYNIIDNKPHINSYSDHGHKPDVIKGNIEFNNIHFTYPSRPDVKVLNGMSLTVR
SGQTIALVGSSGCGKSTTVQLLQRFYDPQEGSVYVDGHDVRSLNVRFLREMIGVVSQEPI
LFATTIAENIRYGRPDVTHQEIEQAAREANAYDFIMTLPDKFETLVGDRGTQMSGGQKQR
IAIARALVRNPKILLLDEATSALDAESETIVQAALDKVRQGRTTIIVAHRLSTIRNADVI
AGFQKGEIVELGTHSQLMEKEGVYHTLVTMQTFKSSEEGEEEVEEQVLEEKSASVTPFSE
TTLIRRKSTKGSSFIGSEKGDKDKTEKEEEDEEVPPVSFLKVLKLNLPEWPYMVVGVICA
TINGGMQPLFAVIFSKIIAVFAEQDQELVRQRSSFYSIMFAVIGVVSFITMFLQGFCFGK
AGEILTMKLRLMAFKAMMRQELGWYDSHKNSVGALTTRLATDAAQVQGATGVRLATLAQN
VANLGTSLIISFVYGWQLTLLILCVVPVMAVAGGIQMKMLSGHAVKDKKELEQAGKIATE
AIENIRTVASLTREQKFESLYQENLIVPYKNSQKKAHVYGITFSFSQAMIYFAYAGCFRF
GAWLIEEGIMTFENVFLVISAVLYGAMAVGEANSFTPNYAKAKISASHLMFLINREPAID
NCSQEGETPDHFDGNVRFEGVTFNYPSRPDLAVLQGLELKVQKGQTLALVGSSGCGKSTT
IQLLERFYDPLQGTVMLDDSDAKKLNIHWLRAQMGIVSQEPVLFDCSLAENIAYGDNTRK
VTMEEIQSAAKAANIHSFIDDLPQKYDTQAGDKGTQLSGGQKQRIAIARAILRNPKVLLL
DEATSALDTESERVVQEALDVARQGRTCIVVAHRLSTIQNADLIAVFQKGVVVEQGTHQQ
LLSQRGVYYSLVTTQLGHGRK
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagaaggatgagatagccgtggccaaagccaagattgagcaaaacggagacatt
ggtgaggataaagatgaagggaagaagggggaaaaggagaaagagccaaagatgccgatg
attggcgccatagctctgttcaggtttgctgatggttgggacaggttgatgatggtgctg
gggaccatcatggccattgtcaatggaactgtccttcctctcatgtgtatcgtctttggg
gacatgactgacggcttcataagagactccatacagacacagaataacttcaccaacatc
actttccctgttttcaacaccactctgggagaggagatgactggccatgctatctactac
tctataatgggtgcggtggtgttggtagcagcttacatgcaggtggccttctggacactg
gcggcaggcaggcaggtcaagcgcctcaggaagctcttcttccactgcatcatgcagcag
gagatcggctggttcgacgtcaacgagacgggagaactcaacacacgcctaacagatgac
atctataagatcaacgaggggataggggacaaggtgggcatgttgatccagtccttcacc
accttcatcgctgccttcatcatcggcttcagccaaggatggaagctcaccctggtcatc
ctggctgtcagccctgtgctgggcttctctgcttttatattcagcaaggtactgacatcc
ttcacgtccctggagcagggtgcttatgctaaagctggagccgtggctgaggaggtgatc
tcttctgtcagaacagtcttcgcctttggtggacaacagaaggagataaccaggtaccag
aagaacctggaggatgctatgaacatggggatccgtaaagccatctctgctaacatggct
atgggcttcaccttcctgatgatctacctgtcctacgctctgtccttctggtatggcagc
acactcatcatatctggagaatacaccattggaactgtcctcaccgtgttcttcacagtg
ctgatcggggcatttgccatgggacagacttctcctaatgtccaggccttcgccagtgcc
cggggggcggcacacaaagtctacaacatcatcgacaataaaccccacatcaacagctac
tcagaccacggccacaagcctgatgtcatcaaaggaaacatagagtttaacaacatccat
ttcacctacccctcacgacctgacgtcaaagtgttgaatggaatgtctctaacggtgcgt
agtggccagaccatagccctggtaggcagtagcggctgtgggaaaagcaccaccgttcag
ctgctgcagaggttctatgatccacaagagggatcagtgtatgtagacggtcatgacgtg
cgctccctgaacgtgcgcttcctgagagagatgattggcgtggtcagtcaggagcccatc
ctgtttgctaccaccatcgctgagaacattcgctacggtcgacctgacgtcactcatcag
gagatagaacaggctgcccgggaggccaacgcctacgacttcatcatgacactacctgac
aaatttgagactctggttggagacagagggacccagatgagtggaggacagaaacagagg
atcgctatcgcacgtgctctcgtacgcaaccccaagatcctcttgttggatgaggctacc
tcagcccttgacgccgaaagtgagaccatcgtacaggctgctttggacaaggtgagacag
ggtcgtactaccatcattgtggcccatcgtctgtctactatccgtaatgctgatgtcatc
gccggcttccagaagggagagattgtagagctgggaacacacagccaactgatggaaaaa
gaaggagtctaccacacacttgtcaccatgcagacgtttaagagttctgaggagggcgaa
gaggaggtggaggagcaggttctggaggagaagagtgcgtcagtgacgccgttctcagag
accaccctcatcaggaggaagtctaccaagggatcatccttcatcggctcagagaaagga
gacaaggacaagaccgagaaggaggaagaggatgaggaggttcctcctgtgtcgtttctg
aaggtgttgaagctgaaccttcctgagtggccctatatggtggttggtgtgatctgtgcc
actatcaacggaggcatgcagcctctcttcgctgtcatcttctctaaaatcatcgctgtg
tttgcagagcaagaccaagaactggttagacaacgctcctccttctactctatcatgttc
gccgtcattggagtcgtctccttcataaccatgttcctacagggattctgttttgggaag
gctggtgagattctgaccatgaagctgagactgatggcctttaaagctatgatgagacag
gagttgggctggtatgacagtcacaagaacagtgttggagctctcaccactagactggct
acagacgcagcacaagtacagggggctacaggagtgcgtttggccactctggcccagaac
gtggctaacctgggcaccagtctgatcatctcgtttgtgtacggctggcagctgactctt
ctcatcctgtgtgtggtacctgtcatggctgtagctggaggcatacagatgaagatgctc
tctggtcacgctgtcaaagacaagaaagagctagaacaggctggcaagattgccacagaa
gccatagagaacatccgtacggtggcgtctctcaccagagagcagaagtttgagtctctg
taccaggagaacctcatagtgccttacaagaactctcagaagaaggcccatgtgtatggc
atcacattctccttctctcaggctatgatctactttgcctatgcaggctgcttccgcttc
ggagcctggctcatagaggaaggcattatgaccttcgaaaatgtcttcctggtgatctct
gcagtgctgtacggagccatggcagtaggagaggccaactcctttacgcctaactatgcc
aaggccaagatatcagcatctcaccttatgttcctcatcaacagagaacctgccatagac
aactgctcacaggagggagaaacaccggaccactttgatggtaacgtgcgtttcgagggg
gtgacgttcaactacccgtcccgtccagaccttgctgtcctgcaggggctggagctgaag
gtgcagaagggacagactctagccctggtgggcagcagtggctgtgggaagagtaccacc
atacaattactggagcgattctacgacccactacagggcacagtgatgttggatgacagt
gatgctaagaagcttaacatccattggctgagggcccagatgggcatcgtatcccaggag
cccgtgctgtttgactgtagtctggcagagaacattgcctacggagacaacacacgcaaa
gttaccatggaggagatccagagtgctgctaaagctgccaacatacacagcttcatagac
gacctgcctcagaagtatgacacccaagccggtgacaaggggacccagttgtcaggaggt
cagaagcagcgtatagccatcgccagagccatcctccgcaaccccaaagtcctgctgctg
gacgaggccacctccgcactggacacagagagcgagagggtggtgcaggaggcactggac
gtggctcggcagggcaggacgtgtatcgtggtggcccaccgcctgtccaccatccagaac
gctgacctgatcgctgtcttccagaagggtgtggtggtggagcagggcactcatcaacaa
ctactgtcccagagaggagtatactactcactggttaccacccagctgggccatggcaga
aaatga
DBGET
integrated database retrieval system