KEGG   Coregonus clupeaformis (lake whitefish): 121544463
Entry
121544463         CDS       T08357                                 
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4
  KO
K08740  DNA mismatch repair protein MSH4
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cclu03036]
    121544463 (msh4)
Chromosome and associated proteins [BR:cclu03036]
 Eukaryotic type
  Meiosis-specific proteins
   Others
    121544463 (msh4)
Motif
Pfam: MutS_V MutS_III MutS_II MutS_IV AAA_14 AAA_23 nSTAND3 ATPase_2
Other DBs
NCBI-GeneID: 121544463
NCBI-ProteinID: XP_045064993
LinkDB
Position
29:23665851..23671374
AA seq 743 aa
MGGTPRLGRTPGSAGAVGIHPVWTPQTEPSAVTTSCSSVTSATAASVIVAVVEGRGLARG
EIGMASINLKCPELVLSQFADTGTYAKVITKLHILVPLEILMPDTASEKGKGTKLYNLIT
ENFQSVSFTAIQRKYFNERKGLEYIQQLCAAEYSTVIMEVQAKYYCLAAAAALLKYFEFI
QNSIYAPKSLKVSFKGSEQTAMIDSASATNLELVVNNRDHRSEHTLLGVLNYTKTPGGGR
RLRSNILEPLLDVDTINIRLDTIQELLQDEELFFGLKNVLCKQMVLKNCNTALLKAYSSS
LEDNRFDMILDQIKTVINDDTSYMKGSLNMRTQKCYAVRPNINEFLDIARRAYTEIVDDI
AGLVDQVGEKYGLLIRTSFSTARGFYIQMKLEGGALPDGELPADFIKVTKHKNNYSFTTA
DLMKMNDRCDEALREIFHMSYVVVCQLLSTVHERIHCLYKLSDAVSMLDMLLSLANACTI
SDYVRPEFTDTLAIKQGRHPILERIVGQQPVSNNSYISEGSNFVIITGPNMSGKSTYLKQ
VALCQIMAQIGSFVPAEYASFRIADQIFTRIGVDDDFETNSSTFMVEMKEAFTLFATHFL
ELCQLETLYPNVENQHMEVQHTRTGDTGTESVFYTFLLSRGSSEERNYGLRAAEMTALPT
TIIQEAKAISSKISQQLLAKHHSDPETQRQRAVYHLATRLLQTARNSKLDPDSLRIYLKG
LKRHYEAELQVTGEPVSMETEEE
NT seq 2232 nt   +upstreamnt  +downstreamnt
atggggggaacccccagactcggcaggaccccaggctcagctggggctgtaggcatacac
cctgtatggacgccacagactgaaccctctgcagtgaccactagctgctcctctgtgacc
tcggccactgctgcctctgtgattgtggcggtggtagaagggcgtgggttggccaggggg
gagattggcatggccagtatcaacctgaaatgcccagagctggtcctctctcagtttgca
gacactgggacctatgccaaggttatcaccaagcttcacatcctggtgccactggagata
ctaatgccagacactgccagtgagaaaggcaaagggaccaagctatacaacctcatcaca
gaaaactttcagtcagtatctttcactgcaatccagagaaagtacttcaatgagagaaaa
gggctggagtacatccagcaactgtgtgcagcagagtacagcactgttatcatggaggtg
caagctaaatactattgcctggcagctgctgctgctttgctgaaatactttgagttcatt
cagaactccatctatgcaccaaagtcactgaaagtaagcttcaaagggagtgagcagact
gccatgatcgattcagcgtctgccactaacctggagctggttgtcaacaaccgggaccac
aggagtgaacataccctgttaggggtgctgaactacaccaaaacccctggtgggggaagg
aggctgcgctctaacattctagagcccttgctggatgtcgataccataaacatacgtctg
gacaccattcaagagctgttacaggacgaggagctcttctttggcttaaagaacgtattg
tgtaaacagatggtgctgaagaactgtaacactgctctgctgaaggcttacagcagctca
ctggaagacaacaggtttgacatgatcctggaccagatcaagacagtgattaatgatgac
accagctacatgaaggggagcctcaacatgcgtacacagaagtgctacgctgtgcgcccc
aacatcaatgagttcctggacatcgcccggcgagcctacactgagattgtggatgacatt
gcagggctggttgaccaggtgggggagaagtatggcttgctgatacgcaccagcttcagc
acagctcgaggcttctacatccagatgaaactggaggggggagctttacctgatggggaa
ctcccagctgacttcatcaaggtgacaaagcacaagaacaactacagcttcaccacagca
gacctgatgaagatgaatgatcgctgtgatgaggctctgagggaaatattccacatgtcc
tatgtggtggtgtgtcagctgctgagtacagttcatgagcgtatccactgtctttacaaa
ctgtccgatgctgtgtccatgctagacatgctgctgtcactagccaatgcatgcaccatc
tcagactatgtgcgtcctgagttcacagacacactggccatcaagcaaggtcgtcacccc
attctggagcgcatcgttggccagcagcccgtgtccaacaacagctacatctctgagggc
agcaactttgtcatcatcactgggcccaacatgagcggcaagtccacctacctcaaacag
gtggcgctgtgccagatcatggctcagataggctcctttgtgcctgctgagtatgcctcc
ttccgcattgctgaccagattttcaccagaatcggggtggatgacgactttgagacaaac
tcctcaacctttatggtggaaatgaaggaggcgttcactctgtttgccacacacttcctg
gagctatgtcagctggagacattgtaccccaatgtggaaaaccagcacatggaggttcag
cacacccgcactggtgacacgggtacagagagtgtcttctataccttcctgctgagccgt
ggaagctctgaggaaagaaactatggtctgagggctgcggagatgactgcactgcctaca
accataatccaagaagcaaaggcgattagctccaaaatcagccaacagctcttggccaag
caccacagtgatccggaaacgcaacggcagagagcagtgtaccacctggccacccggctc
ctgcagacagccaggaactccaagctggaccctgacagcctgcgcatctatctgaagggc
ctgaagagacactatgaagcagagctgcaggtcacaggagagcctgtgtccatggagaca
gaggaagaatga

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