Coregonus clupeaformis (lake whitefish): 121544463
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Entry
121544463 CDS
T08357
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121544463 (msh4)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Meiosis-specific proteins
Others
121544463 (msh4)
BRITE hierarchy
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_23
nSTAND3
ATPase_2
Motif
Other DBs
NCBI-GeneID:
121544463
NCBI-ProteinID:
XP_045064993
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All DBs
Position
29:23665851..23671374
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AA seq
743 aa
AA seq
DB search
MGGTPRLGRTPGSAGAVGIHPVWTPQTEPSAVTTSCSSVTSATAASVIVAVVEGRGLARG
EIGMASINLKCPELVLSQFADTGTYAKVITKLHILVPLEILMPDTASEKGKGTKLYNLIT
ENFQSVSFTAIQRKYFNERKGLEYIQQLCAAEYSTVIMEVQAKYYCLAAAAALLKYFEFI
QNSIYAPKSLKVSFKGSEQTAMIDSASATNLELVVNNRDHRSEHTLLGVLNYTKTPGGGR
RLRSNILEPLLDVDTINIRLDTIQELLQDEELFFGLKNVLCKQMVLKNCNTALLKAYSSS
LEDNRFDMILDQIKTVINDDTSYMKGSLNMRTQKCYAVRPNINEFLDIARRAYTEIVDDI
AGLVDQVGEKYGLLIRTSFSTARGFYIQMKLEGGALPDGELPADFIKVTKHKNNYSFTTA
DLMKMNDRCDEALREIFHMSYVVVCQLLSTVHERIHCLYKLSDAVSMLDMLLSLANACTI
SDYVRPEFTDTLAIKQGRHPILERIVGQQPVSNNSYISEGSNFVIITGPNMSGKSTYLKQ
VALCQIMAQIGSFVPAEYASFRIADQIFTRIGVDDDFETNSSTFMVEMKEAFTLFATHFL
ELCQLETLYPNVENQHMEVQHTRTGDTGTESVFYTFLLSRGSSEERNYGLRAAEMTALPT
TIIQEAKAISSKISQQLLAKHHSDPETQRQRAVYHLATRLLQTARNSKLDPDSLRIYLKG
LKRHYEAELQVTGEPVSMETEEE
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggggggaacccccagactcggcaggaccccaggctcagctggggctgtaggcatacac
cctgtatggacgccacagactgaaccctctgcagtgaccactagctgctcctctgtgacc
tcggccactgctgcctctgtgattgtggcggtggtagaagggcgtgggttggccaggggg
gagattggcatggccagtatcaacctgaaatgcccagagctggtcctctctcagtttgca
gacactgggacctatgccaaggttatcaccaagcttcacatcctggtgccactggagata
ctaatgccagacactgccagtgagaaaggcaaagggaccaagctatacaacctcatcaca
gaaaactttcagtcagtatctttcactgcaatccagagaaagtacttcaatgagagaaaa
gggctggagtacatccagcaactgtgtgcagcagagtacagcactgttatcatggaggtg
caagctaaatactattgcctggcagctgctgctgctttgctgaaatactttgagttcatt
cagaactccatctatgcaccaaagtcactgaaagtaagcttcaaagggagtgagcagact
gccatgatcgattcagcgtctgccactaacctggagctggttgtcaacaaccgggaccac
aggagtgaacataccctgttaggggtgctgaactacaccaaaacccctggtgggggaagg
aggctgcgctctaacattctagagcccttgctggatgtcgataccataaacatacgtctg
gacaccattcaagagctgttacaggacgaggagctcttctttggcttaaagaacgtattg
tgtaaacagatggtgctgaagaactgtaacactgctctgctgaaggcttacagcagctca
ctggaagacaacaggtttgacatgatcctggaccagatcaagacagtgattaatgatgac
accagctacatgaaggggagcctcaacatgcgtacacagaagtgctacgctgtgcgcccc
aacatcaatgagttcctggacatcgcccggcgagcctacactgagattgtggatgacatt
gcagggctggttgaccaggtgggggagaagtatggcttgctgatacgcaccagcttcagc
acagctcgaggcttctacatccagatgaaactggaggggggagctttacctgatggggaa
ctcccagctgacttcatcaaggtgacaaagcacaagaacaactacagcttcaccacagca
gacctgatgaagatgaatgatcgctgtgatgaggctctgagggaaatattccacatgtcc
tatgtggtggtgtgtcagctgctgagtacagttcatgagcgtatccactgtctttacaaa
ctgtccgatgctgtgtccatgctagacatgctgctgtcactagccaatgcatgcaccatc
tcagactatgtgcgtcctgagttcacagacacactggccatcaagcaaggtcgtcacccc
attctggagcgcatcgttggccagcagcccgtgtccaacaacagctacatctctgagggc
agcaactttgtcatcatcactgggcccaacatgagcggcaagtccacctacctcaaacag
gtggcgctgtgccagatcatggctcagataggctcctttgtgcctgctgagtatgcctcc
ttccgcattgctgaccagattttcaccagaatcggggtggatgacgactttgagacaaac
tcctcaacctttatggtggaaatgaaggaggcgttcactctgtttgccacacacttcctg
gagctatgtcagctggagacattgtaccccaatgtggaaaaccagcacatggaggttcag
cacacccgcactggtgacacgggtacagagagtgtcttctataccttcctgctgagccgt
ggaagctctgaggaaagaaactatggtctgagggctgcggagatgactgcactgcctaca
accataatccaagaagcaaaggcgattagctccaaaatcagccaacagctcttggccaag
caccacagtgatccggaaacgcaacggcagagagcagtgtaccacctggccacccggctc
ctgcagacagccaggaactccaagctggaccctgacagcctgcgcatctatctgaagggc
ctgaagagacactatgaagcagagctgcaggtcacaggagagcctgtgtccatggagaca
gaggaagaatga
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