Coregonus clupeaformis (lake whitefish): 121544628
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Entry
121544628 CDS
T08357
Name
(RefSeq) tudor domain-containing 6
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121544628
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
121544628
BRITE hierarchy
Motif
Pfam:
TUDOR
Agenet
SGF29_Tudor
SAWADEE
SMN_Tudor
Motif
Other DBs
NCBI-GeneID:
121544628
NCBI-ProteinID:
XP_041710550
LinkDB
All DBs
Position
29:9260821..9275021
Genome browser
AA seq
1881 aa
AA seq
DB search
MCSIPGLPTPGSQVTVLITRVNLNPICALVELWGNFDQERQHAYQQMRRGIQIPRQSFCE
SEGNPGDLCLAHLNVTWHRARIISRHGQLYNVFLIDEGRAHVATNSTLAWGQNDCFLLPP
EVEFCVLANVSPLSHENKWTPTASEFLESLCGKTVNGMVQDVLMPDRTVLLYIPIVNKHM
CEVGFARKLPSDTFKQLVLSSLNLPKSQVASTEALPPTVSHKQPDAGRELEKFQQYFYPE
LLTDSIETVEVTEVINPQRIFCKLSIFSQELKKLSEHIHDYYEGRSAFCKATQLASGAPC
AARGSDGKWYRSVLQQDIGSDSAVEVLHVDYGKTDFVHVGDIRPLAAKFFRMPVVTYVCS
LHGIEDKGLGWTVDEIKYLKSVLLHKTVIAKFEYHNLSEGINCVTLYGDDNVNINKLFGV
KERCLLESERPPPRVKEESFATDIHNSVPPLTTPHSPSATETVLNEHLFQVGSTLEVKVS
CIESPAKFWCQMAQEGTSLQILMQEMQHRYASSSPQQIDEDICVALHHDNGMWYRARIVE
NDQSPHVEVRFLDYGQTRRVSLQDLRPLDPVFRRLKTQAFQCFLQNLNTPTSPVPAEWSD
AASSEFQKFVDSTADSNVGLKCTVHAVMRDNQGLVVNMVDIETPVQSACKLLVQKGVKAP
APPLSSAPPDTENFSLHNIEVGGKEKVWITSAKSVSHFYGQLERNSGVIDKLTKDLQHFC
HQPLQSTNCPQSLETVCLAKYTDNQWYRGQIKATHPTLQVHFVDYGDTVAVGQSDILPCP
VEAGSLMSVPVQAVPFGLFGVPEDVSQEVNRWFEKHATDLSFTITAVAKDSGGKLLVELY
DGTTHVNEKVREKLKEARPGKEITFVQSPSLSSKLSTTKLSLPESVQMPTSQDVRRTVIM
HSTTAMCFASPQRKVGQSTPQQSLLDNTPEMKPMVEHGGQMCSFSKLTDLPSRPLKPGLV
TEVYVSHCNSPSSFFIQLTKDEDDIFSLVEKLNGSPSFCDAPPVDLNELQLGDLVNAEYP
EDSSWYRAVVRRKPGNGTVHVEFIDFGNEATIPSLKVKQLDKQFIEYPRLSIHCVLGRIT
NANNKEIWDEDVTMMFKKATTTENAEKKLACTFMKETGSVWEVSLEDQGIVLAHSLVEAS
RTVRADVSQLSCSGENPIPLLYKKPCISQNQALDVYASSIVGPNYFWCQHANSEELYRIS
RIVQEFVDSALQDPVPMDTLSPRSPCLALFAEDNQWYRARIIRKTSDLFTVLFVDYGNES
EVDLKAIRSVPPLLLESAPQAFLCSLAGVEHPEGAWDNNAVDGFYQLVVDKPLKVTVQNM
YNNLESLTPQYQVKVECEEHVINDLMRSYWHCSDSHVHSKTECADELFSSDVTVSNETLN
LSGYKCLTQETTPKLNSTEVPMMDISPSTTQCSGDNLAVRTICYDGLAGVSSSGSNVPSE
SVPKLENLPTRSIKPGWVADVYVSQCNSPSSFFVQLVEDEKYLFSLVERLNSDQSDGVAR
KNVANPQPGDLVNSEFPDDHSWYRAVILGTNGEDKVNVQYIDFGNEASVSPLKVCRLDAQ
FLEHPRFSIHCSLSGLADTKDKGLEQEISCQVKKVANADSARKLECKFIKETGSTWEVCL
DKNIVLADSLYLGCSAGESTHLDQQSPSSGSLPSQMERSHREHTTLLQFWKPDMFLGQTL
DVYASSIVGPGYFWCQYANSEELAEISKVCQLIGNSEQKDTVLMTTLSSGSLCLALFAED
EQWYRAQIVSKTDVISVVFVDYGNESETDLKSLKSVPLQLLEFPPQAFLCSLAEFENSEG
SWDDNALDGFYELLADKPLKVTVQKMDNNNKLPVPQYQVKVECEKLIVNDFMKNCWRSSP
TESQPEEAANHCSWQLAESDD
NT seq
5646 nt
NT seq
+upstream
nt +downstream
nt
atgtgttccattcctggactgccaactccaggatcccaagtcacagttctcattacaagg
gtaaacctaaatcctatctgtgctctagtggaattgtggggcaactttgatcaagaaagg
caacatgcttaccagcaaatgagaaggggaattcagattcccagacagagcttttgtgaa
tcagagggaaaccctggagacttgtgtctagctcatctgaatgtaacctggcacagagct
aggataatatcaagacatgggcagctttacaatgtgtttctcattgatgaagggagagct
catgttgctacaaacagcaccttagcatggggtcagaatgactgttttcttttacctcca
gaagtggagttctgtgttcttgccaatgtgtcccccttatcccatgaaaacaaatggact
ccaacagcctcagagtttttggagtctctttgtggcaaaacggtcaatggaatggttcag
gatgtattgatgccagacagaacagtcctcctttatattccgatcgttaacaaacatatg
tgcgaagtcggctttgccagaaagctccccagtgacacattcaaacaacttgttctatcg
tctctgaacttgccaaagagtcaagttgcctcgacagaggcattgcctcctacagtgtca
cacaaacagcctgatgctgggagagaacttgagaagtttcaacaatacttctatccagaa
ctgctaacagactccattgagactgtggaagtcacagaggtgataaacccacagcgtatc
ttctgcaaactctcaattttctctcaggagctgaagaaactctctgagcatattcatgac
tactacgaaggaagatctgctttttgcaaggcaacacaactggcctcaggcgctccatgt
gcagctagagggagcgatggcaagtggtatcgatctgtgctacagcaggacattggatca
gacagtgctgtggaagtactacatgtggattatgggaagacagactttgtccatgtgggt
gacatcagaccactggctgccaagttcttcagaatgccagttgtaacttatgtctgctcc
ctccacggtattgaggacaaaggccttggatggacagtggatgaaataaagtatctgaaa
tctgtgctgctgcacaagactgtcatcgccaaatttgaataccacaacttgtcagaaggc
atcaactgtgtgacactctatggagacgacaatgtaaacatcaacaagctttttggagtg
aaggagagatgtcttctggagtctgagaggcctccaccacgagtcaaagaggaaagcttt
gccacagacatacacaacagtgtgcctccccttaccacgccacactctccctcagcaaca
gagactgtcctcaatgaacatttgttccaggtaggaagcaccttggaggtcaaagtatct
tgtattgaaagtccggcaaaattctggtgccagatggcacaagagggtacaagtcttcag
atccttatgcaagaaatgcagcatcgttatgcctccagttctccacagcaaattgatgaa
gacatttgtgttgctctacatcatgacaatggtatgtggtacagagcacggatcgttgag
aatgatcagtctccccatgtagaggtgcgtttcttagattacggacaaaccaggagggtc
tctctgcaggacctgcgccccctggacccagtgtttcgaagactgaagacccaggccttt
cagtgtttcctgcagaatctgaacactcctacaagtcctgttccagcagaatggagtgat
gctgcctcatcggagttccagaagtttgtagattccactgctgactcaaatgtaggattg
aaatgcactgtacatgcagtcatgcgtgacaaccaaggcttggtggttaatatggtagat
attgaaacaccagttcaaagcgcatgcaaactactggttcagaaaggagtaaaggcccca
gctcctccactttcttctgccccacccgacacggaaaacttctcattacacaatattgaa
gttggaggaaaagagaaggtgtggataacgagtgcaaaaagtgtttctcacttctatggc
cagcttgaaagaaattctggtgtgattgacaaattgacaaaagatcttcagcatttctgc
caccagccactgcagagcacaaactgtcctcaatcactagaaactgtttgtttagctaaa
tacactgataaccagtggtacagaggacagattaaagcaacacatccaacccttcaggtt
cactttgtggattatggtgacacagttgcagtgggtcaatcagatatccttccctgccct
gtggaagccggctcgctcatgtcagttcctgtgcaagctgttccgtttggactcttcggt
gttccagaagatgtatcccaagaggtcaaccgctggtttgaaaagcatgccacggacctg
agctttaccatcacagcggtggctaaagactctggtggaaagcttttagttgaactgtat
gacggaacgacacatgtaaatgagaaggtcagagagaagctgaaagaggcgagaccagga
aaagaaataacttttgtccaatcgccttctctgagctctaaactatcaactactaaattg
agtttgccagaaagtgtgcaaatgccaacatctcaggatgtgaggagaacggtaataatg
cacagtaccactgcaatgtgtttcgcatctccacaaagaaaagttggacagtctactcct
cagcagtcactgttggacaatacacctgaaatgaagcctatggttgaacatggtggacag
atgtgtagtttttccaaactcacagaccttccttcaagacccttgaaaccagggttggta
acagaggtgtatgtttcacactgcaacagcccctccagtttctttattcagttgacaaag
gatgaagatgatatattctctcttgtggagaaactaaatggctcaccgtcattttgtgat
gcccctccagttgacttgaacgaactgcagctcggtgacttggtgaatgcagagtatcct
gaagacagctcatggtatcgtgcagttgttaggcgcaaacctgggaatggaaccgttcat
gttgaattcatagactttggaaatgaagcaactattccatctctgaaagtcaaacaactc
gacaagcagttcatagaatatcccaggctcagtattcactgtgtacttggaagaataact
aatgctaacaacaaagagatatgggatgaagatgtcacaatgatgttcaaaaaggctaca
acaacagaaaacgctgagaagaaactggcatgcacattcatgaaggagaccggatcagtt
tgggaggtcagtctagaagatcaaggtattgtgttggcacattccttagttgaagctagt
cgaacagtcagagcagatgtatcacaactgtcttgttcaggtgaaaacccgattcccctg
ctgtacaagaagccatgcatttcccagaaccaggctttagatgtctatgcatcctctata
gttggacctaactacttctggtgccaacatgcaaactctgaggagctatacaggatctca
agaattgttcaagagtttgtagactctgcgctgcaggaccctgtccccatggataccctg
agccccagaagtccttgtctggctctctttgcagaagacaaccaatggtatcgagctcgg
atcattcgcaaaactagtgatcttttcactgttctttttgtggactatggaaatgagtcc
gaagttgatcttaaggcgataaggtcagttccacctctgctcctagagagcgccccacag
gccttcctgtgttctctggctggagttgagcacccagaaggtgcctgggataacaacgct
gttgatgggttttatcagcttgtagtcgacaaaccactgaaagttacagttcagaatatg
tataataatctggaaagtctcaccccacaataccaggtcaaagtggagtgtgaggagcat
gttatcaacgacttgatgcgaagttactggcattgctctgattcgcacgtccacagcaaa
accgagtgcgctgacgagctcttctcctctgacgtgactgtttcaaatgaaaccttgaac
ctgtctgggtataaatgtcttacacaagaaacaactccaaaattgaattccactgaggtt
ccaatgatggatatatcaccaagcaccacgcaatgttcaggagacaatctggcagtcagg
acaatctgttatgatggtcttgcaggagtctcctcaagtggatccaatgtaccttccgag
agtgtccccaaacttgaaaatcttccaacacgatcaataaaaccaggttgggtagcagat
gtctatgtttcacaatgcaacagtccatcaagtttctttgttcaattagtagaggatgaa
aagtatctgttctctcttgtggaaagactcaattctgaccaatcagatggtgttgcacgc
aagaacgttgccaatccgcagccaggggatctggtgaattctgagtttccagatgaccat
tcctggtatcgtgcagtcattctaggaacaaatggagaagacaaagttaatgtgcaatac
atagactttggtaatgaagcatccgtttcacccctcaaggtttgcaggctggacgcccag
ttcctggagcacccaagatttagcatccattgttctttaagtggacttgcggacactaaa
gacaaaggattggagcaggaaattagttgccaggtcaaaaaagttgcaaatgcggacagt
gcgagaaaattggaatgcaagttcatcaaagagactggatccacttgggaggtctgtctg
gacaagaacatcgtactagcagattcactatatctgggttgttcagctggagaatctact
caccttgaccaacaaagcccaagttctggatctttgccatcccagatggagaggagtcac
agagagcatactacactgctgcaattctggaaacctgatatgttcctgggacagactttg
gatgtgtacgcctcctccatagttggccctggttatttctggtgccagtatgcaaactct
gaggagcttgctgaaatctctaaagtttgtcagctcattggaaactctgagcagaaggac
acagtcctcatgactaccctgagctctggaagtctttgtctggctctctttgccgaagac
gagcaatggtatcgagctcagattgttagcaaaacggatgttatctctgttgtctttgtg
gattatggaaatgagtccgaaactgatttgaagtctttgaagtctgttccacttcagcta
ctagaattccctcctcaggcctttctgtgttccctggctgaatttgagaactcagaaggc
agctgggatgacaatgcccttgatggattctatgagctccttgctgataagccgctgaaa
gtgacagttcagaaaatggataataataacaagctacccgttcctcaataccaagtgaaa
gtagagtgtgagaagctgattgtgaatgacttcatgaagaattgctggagaagctccccc
accgagtctcaaccagaagaggcggctaatcattgtagctggcaactggcagaatctgat
gattga
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integrated database retrieval system