Coregonus clupeaformis (lake whitefish): 121547728
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Entry
121547728 CDS
T08357
Name
(RefSeq) RNA binding protein fox-1 homolog 3-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121547728
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121547728
BRITE hierarchy
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
121547728
NCBI-ProteinID:
XP_045065830
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All DBs
Position
31:complement(40212101..41073721)
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AA seq
387 aa
AA seq
DB search
MDTPSWAETKPGSGLCKQHGTIALFGNVVYSGLLNEHIWHFGVPLVNRLGNQEAPAPPEA
MAQPYPPGQYPPQNGIPAEYAPPHPHPHPPADYTGQSTVAEHALTLYTHTQTHSEQPGNE
NNTSTLTATLSQADEVAQTEGSHQLHLQQCDSSEKQQPKRLHVSNIPFRFRDPDLRQMFG
QFGKILDVEIIFNERGSKGFGFVTFETSADADRAREKLNGTIVEGRKIEVNNATARVMTN
KKVANPYTNGWKLNPMVGAVYGPDLYAVTGFPYPSTGAAVAYRGAHLRGRGRAVYNTFRA
APPPPPIPAYGAVVYQDAFYGAEIYGGYAAYRYAQPAATAAAAYSDSYGRVYATADPYHH
TIGPAATYGVGTMASLYRGGCSRFTPY
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggatacccccagctgggcagaaaccaaaccaggaagtggcttgtgtaagcagcacgga
actattgctctctttggcaacgtggtgtacagcggcctgctcaacgagcacatctggcat
ttcggggtaccccttgtcaacagactgggtaaccaagaggcgccagcccccccggaagcg
atggcccagccctaccccccaggccagtaccccccccagaacggcatcccagcggagtac
gcccctcctcacccccacccccacccgccagcagactacacgggtcagagcacggtggca
gagcacgccctaacgctgtacacacacacacagacacacagcgaacagcccggaaacgag
aataacacgtccaccctcacagctacattatcgcaggcagatgaggttgcgcagacggag
ggttcccatcagctccacctgcagcagtgtgattcgtcagagaagcagcagcccaaacgg
ttacacgtctccaacatcccattccgcttcagagatccagacctcaggcaaatgtttggg
caatttgggaagattttagacgtggagattatctttaacgagcgaggctcgaagggtttc
gggtttgtaacatttgaaacgagtgcagatgcggaccgtgcacgtgagaaactaaatggt
acaatcgtagagggacgcaaaatcgaggtcaacaacgcaacagcaagagttatgacaaac
aaaaaggtggcaaacccatacaccaatggctggaagctgaacccgatggtgggagctgtc
tatggaccagacttgtatgcagtgacaggttttccctaccctagtacaggagcggcagta
gcctatcggggagctcatttgagagggagggggcgggccgtctacaacacattccgcgcc
gcacccccacccccacccatccctgcctacggagcggttgtttaccaggacgccttctat
ggtgcagaaatatacgggggttatgcagcgtacagatacgcccagccagcagccacggct
gcagccgcatacagcgacagttacgggagagtctacgccacagcggacccgtatcaccac
acgattggtcctgcggccacgtacggtgtgggcaccatggctagcctatacagaggaggt
tgcagtcgcttcactccgtactag
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