Coregonus clupeaformis (lake whitefish): 121548968
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Entry
121548968 CDS
T08357
Name
(RefSeq) hairy/enhancer-of-split related with YRPW motif protein 2-like
KO
K09091
hairy and enhancer of split related with YRPW motif
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121548968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121548968
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
121548968
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Motif
Pfam:
HLH
Hairy_orange
dCache_2
Motif
Other DBs
NCBI-GeneID:
121548968
NCBI-ProteinID:
XP_041716610
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Position
33:29529444..29532752
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AA seq
334 aa
AA seq
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MKRPCEDSTSDSDMDETIDVGSENNYSGHSNGSFIRCGSPTTTTQVMARKKRRGIIEKRR
RDRINNSLSELRRLVPTAFEKQGSAKLEKAEILQMTVDHLKMLQTTGGKGYFDANSLAMD
FMSVGFRECLTEVARYLSSVEGLDSIDPLRVRLVSHLSTCASQREAAAMTSSMAHHQQVL
HPHHWATAFHPLPAAFLQHSGLPSSDSTASRLSVEVPQRGSALLTATFSHTDSSHRAPSN
GSVAPCVPPLSTSLLSLSATVHAAAAAAAAQTFPLSFPGGFPIFTPHSVSSTASMVASAV
SPSISTSSTSQQSRDRESSSSKPYRPWGTEVGAF
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggccttgtgaggatagtacttctgacagcgacatggatgaaactattgatgtc
ggcagtgagaataattattctggacacagcaatgggtcatttattagatgtggctcccca
acaacaacaacccaagttatggcaagaaaaaaacgaagagggatcattgagaagagaagg
agggatcgaatcaataatagtttatcagagttacgtcgacttgtcccaactgcatttgaa
aaacaaggttctgccaaattagagaaagctgaaatattgcagatgacagtggatcaccta
aagatgctgcagaccactggcggtaaagggtattttgatgccaattccctggctatggac
ttcatgagcgtgggcttcagggagtgtctgacagaggtggccaggtacctgagctctgta
gagggattagacagcattgaccccctgcgcgtgcgcctggtctcccacctcagcacctgc
gcgtcccagagggaggcggctgccatgacctcatccatggcacaccaccagcaggtgctc
caccctcaccactgggccaccgccttccaccccctccccgccgccttcctccagcacagt
ggactgccctcctcagacagcaccgccagcagactgtctgtggaggtgccccagcgcggc
tcggccctcctaacggccaccttctcccacactgactcttctcacagggcgccctctaat
ggcagcgtggcaccctgcgtccccccactctccacctccctcctgtctctctccgccacc
gttcacgcggcggccgctgctgctgcggcccagactttccccctgtcctttcccggagga
ttccccatcttcacacctcacagtgtgagcagtacagcgtctatggtagcttcagctgtg
agcccctccatatccacctcatccacttcacagcagagcagagaccgagagagcagcagc
agcaaaccatacagaccttggggaacagaagtgggagccttttaa
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