Coregonus clupeaformis (lake whitefish): 121550417
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Entry
121550417 CDS
T08357
Name
(RefSeq) nuclear envelope pore membrane protein POM 121
KO
K14316
nuclear pore complex protein Nup121
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121550417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121550417
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121550417
BRITE hierarchy
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
121550417
NCBI-ProteinID:
XP_041718599
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All DBs
Position
35:complement(7370685..7388043)
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AA seq
1186 aa
AA seq
DB search
MSPREKRLIALISLVFCAIAIFCLIFYYIPTFLYIAFILGVCSVACCYHSGESLYVTLGP
HPRRGLTIPPVLRRWLPGIANGVPTAGRVRSRTVKGDVRESVVFTGQRRSESAIYRKDAG
HSDSFLLSPRDILMGSYIGKAESPPSVVGRPRFGAISGANPNAREQLRERLARPNQAVHT
PNRRLSFGGEPLGTMGRFTITPQRHYPLQQTGTTSVGILPPAQWDSFRKKNILTPRNSPA
VHSPVTVKIARPDHNTTRSPLFDHLNSPGVLGSPGLAAPADPCSRETVLSVLKESRKREV
DDEDDRSFTAGQKSKRRRHDSSGSAHSAFEPLLPNGAPSQLVPNTLKRGLNAMVEESTMK
RSRTFSISSVSCGLTPSGTLGTVRNSILSSLSSSQGFAQRKKASTRSLSPLSSPGSSRSQ
TPERASKKPREEDARSPSSASSARSDKTLTDPAPNTGKLTPAPEVPVASASSDSAGSGKR
KRKIPLVSSRRGDQISLPPPPELGYTITVKDLDQEKKAALSQINTVLEEPVPEPEKPAPA
PVVTTSSKPPVSNDPTPTLATLLASHLPVSTPSSVAAPIPVINLDPVPSSTVSTAPTSTA
SPVTTTTPAANPLLESLKMMRNNPLTSTAAANTTAVTTPAPLVPAEQKSKTSLTAPQPTP
ASLSQPALPSLSQPASTMPSAFTQVLSQVTKAPSSVPTLGGASLFGLANPLTALSSSPAP
TTTSTATTEATSSNNPLLASVFKPIFGAAAPASAPEGTPALPTFKPIFGSATATSAFGQP
ASTSAPSKASASALVFSGLTNISTVAPAASLFTGLSNSTAPAPAPSTEPAAPPSVKSLFG
NWSALPATTAATTTAPATGSTFQFGAASTTTPAPTLRSTAATTTNNSGFSFGAMTTASAA
TQPAPSATAQGGFTFGQAAATQNSTTASFGGFGMATAATATAAAPASQSTFTFGKSSFEA
PAASAFPSATQAPAAPAAANPFTFGSAAAGATPAPAPFAFGAAATTVASTFGTTTKLAFG
GNSTGFAFGNTTGSPATPAAPAFGSATQTVGTLPASAPTFSFGGVSTQQAPATPAQPATG
GFNFGAAISGTQFGTPNPTTQTPGFNFGAAASDKPAFGTSTPAFGQSTAAGPVPFGSPGT
PVQGFSAMASSPFGSPSAPSFSIGAGSKTSGARQRLQARRQHPRKK
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaagagagaagcggttaatagcgctgatctctctcgtgttctgtgctatcgca
atattctgtctaattttctattatattccaacctttctttatatagctttcattcttgga
gtttgttccgttgcctgttgttatcacagcggagaatcactctacgttacgttaggccca
catccacgccgtggtctcacgattccacccgtgctgcgacgctggttgccagggattgcg
aacggagtacccacagcgggaagagtcagaagtcgtaccgtcaagggtgatgttagggaa
tcggtagtatttactggccaacgacgttccgagagcgctatttatcggaaagacgcggga
cacagtgactcatttctgctcagtcctcgggatatactcatgggaagttacattgggaag
gcagaaagtcctccctcagttgtggggaggccgcgattcggtgcaatttcgggtgctaac
cccaacgcacgagaacaactacgcgaaagattggcgcgacccaaccaggctgttcatact
ccaaacagacgactgtcattcgggggggagccccttggcactatgggcaggttcaccatc
actccccagcgccactaccccctccagcagactggcaccacctctgtgggcatcctgccc
ccggcccagtgggacagcttcagaaagaagaatattctcacccctcgcaactccccggca
gtccacagtccagtcacagtgaagatcgctaggccagatcacaacaccactcgatctccg
ttatttgatcatttgaactctccaggagtccttggctctccaggccttgcggcccctgca
gacccctgctccagggagactgttctgagcgtgctcaaagagagtcgcaaaagagaggtg
gacgatgaagatgacaggagcttcactgcagggcaaaagagcaaaaggaggcgccatgac
agcagtgggagtgctcactctgcatttgagccactgctgcccaatggagctccatcacag
ctggtgccgaatactctgaagcgagggctaaatgctatggtggaggagtcaacaatgaag
aggtcacgcaccttctccatcagctctgtgagctgtggcctgacccccagcggcaccctg
ggcacggtccgcaactccatcctcagctccctcagctcctcacaaggctttgctcagcgg
aaaaaagcctccacccgcagcctctccccgctctccagcccagggtcgtcccggtcccag
accccagagagagcctctaaaaagcccagggaagaggatgctcgctcgcccagctctgcg
tcctcggcgaggtctgacaagacgttgacagacccagcacccaacactgggaagctgact
ccagcccctgaagtccctgtggcttcagcctcgtcagactctgccggtagcgggaaacgg
aaacgcaagattccgctggtgtccagccgtagaggagaccaaatctctctgccgccacct
cctgagctgggctacacaatcacggtgaaagacctggatcaggagaagaaagccgctctc
agccagatcaacacagtcctcgaagagcctgttccagagccagagaagcctgcgccagct
ccagtagtgaccacatcttctaagcctcccgtgtcaaacgaccccacacccaccctggcc
accctgctggccagccatcttcccgtatcaacaccttccagtgtggctgctcctatccct
gtcatcaacctggaccccgtcccctcaagcaccgtcagcacggccccaacctccacagcc
tcccccgtcaccaccacaacccccgcagccaaccccctcctggagtctctgaaaatgatg
aggaacaaccccctcaccagtactgctgctgccaatactacagcggtgacgacccctgca
ccactggtgcctgcagagcagaagtcgaaaactagcttgactgctcctcagcccacacca
gcctccctctcccagcctgcactaccctccctctcccagcctgccagcaccatgccctct
gccttcacccaggtgctgagccaagtcaccaaggcccccagcagtgtccccaccctgggt
ggagctagcctgtttggactggccaatccactgaccgccctgtcctcctcaccggccccc
accaccacctcaaccgccaccacagaagcaaccagtagtaataatcccctcctggcctct
gtgttcaagcccatcttcggggctgcggccccagcctcagccccagagggcacacctgct
cttcccacctttaaacccatatttggaagcgccacagccaccagtgcttttggacagcca
gcctccacctcagctccctccaaagccagcgcgtctgccttagtgttcagcgggctaacc
aacattagtacggtggccccagccgcctccctgttcactgggctgtccaacagcaccgct
ccagctccagccccctccaccgaaccagccgccccgccatctgtcaagtctctgtttgga
aactggagtgcgctgcctgcaacgaccgctgccacaaccactgcccctgccacaggaagt
accttccagttcggcgccgcctccaccacaactcctgcacccaccctccgctccaccgca
gccactaccactaacaacagcggcttttcgtttggtgcgatgaccaccgcctctgccgcc
actcaacctgccccctcagccaccgcccaggggggattcacctttggccaggctgcagcc
acccagaactctaccaccgcatccttcggtggctttggcatggccactgcagccactgct
actgctgccgcacctgcaagccagtccacgttcacgtttgggaagtcgtcgttcgaagct
ccggcggcatcagcgttccccagtgcgactcaggccccggctgctcctgcggcagctaat
cctttcacatttgggtcagctgcagctggggccaccccagcccctgccccctttgctttt
ggcgcggctgccactacagtggcctctacctttgggaccaccactaagctggcatttgga
ggcaactccacaggttttgcatttggcaacaccacgggttccccggccaccccagcagcc
cctgcctttggctctgccacccagactgtcggcacactcccagcctccgccccaaccttc
tcatttggtggtgtgtccacacagcaggcccctgctacccctgcccagccagccaccgga
ggattcaacttcggcgcggccatttcaggcactcagtttggaacccctaaccccacaaca
cagacgccaggcttcaacttcggggctgctgctagtgacaagccagcctttgggacatct
acccctgcttttggccagagcacagcagcaggtcctgtcccctttggaagcccaggaact
ccagtccaaggattcagtgctatggcatcctcaccattcggctctccatcagctccttcg
ttctccatcggcgctggctccaagacatcaggggcgcgccagaggctacaggcccgaagg
cagcaccccaggaagaagtag
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