Coregonus clupeaformis (lake whitefish): 121550973
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Entry
121550973 CDS
T08357
Name
(RefSeq) RNA binding protein fox-1 homolog 2 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121550973
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121550973
BRITE hierarchy
Motif
Pfam:
Fox-1_C
RRM_1
Motif
Other DBs
NCBI-GeneID:
121550973
NCBI-ProteinID:
XP_045074433
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MLMSTDVASIMLPITRGMMDRERDIDTATGPHANTTGGPAAVVRGMKRGDPEPDAQTAAT
LTELAAAECKRPRIDGTVGVGDIGQNNDPLTPGFLGYPPHSQGSQDSTGGQEGLVPPPFS
AFPPPPPPQNGLGTEFGGALFGAGGQGPSDSGAGTNGSATTPNILPTPQTEVSPGQVDGV
GQCLAVELAGGVSGADASEAKGTPKRLHVSNIPFRFRDPDLRQMFGQFGKIIDVEIIFNE
RGSKGFGFVTFETSADAEKARERLHGTLVEGRKIEVNNATARVMTNKKMVSPYPNGEALS
TLPYAGWKLSPMVQAMYGPELYAVPGFPYPSAAAAASTAAAFRGAHLRGRGRPVYSAVRA
AVPQPALPAYPGVVYQDGGFYGAADLYGGYPAAAYRFAQPAAVTGATAAAAAAYSDSYGR
VYTTDPYHALGPAAAAYGVGAMVRAPQPQHYNNRLETELSSLYASLYRAGYSRFAPY
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgtcgcatccataatgttacccattactcggggaatgatggac
cgggaaagggacattgatacagcaaccggaccccacgcgaacacgaccgggggtccagca
gcagtagtccggggaatgaaacgaggggatcctgagcccgatgctcaaacagctgcaact
ttgaccgaattagcagcagcagagtgcaaacggccaaggatagacgggacggtgggtgtt
ggtgacattggacagaacaacgaccctttaaccccaggtttccttggatacccacctcac
agccagggttctcaagattcaacggggggccaggaggggctggtgcccccgcccttctca
gcgttccctccaccaccccctccgcagaacggcctggggacagagtttggcggtgctttg
tttggtgcaggtgggcaggggccatcggattcaggggctggaacaaatggctcagccacc
actcccaacatcttacccaccccgcagacagaggtgtccccaggacaggtagatggagtg
gggcagtgcttggcagtagaattagcaggaggagtatccggggctgacgcctcagaggcc
aaaggaaccccaaaacgacttcacgtctccaacatccccttccgcttccgagaccctgac
ctcaggcagatgtttgggcaatttgggaagattattgatgttgagatcattttcaatgag
aggggctcaaagggctttggctttgtcacgtttgagaccagcgccgacgcggagaaagcc
cgggaaaggcttcacggcacgctagtggaaggtcgcaagatagaggttaacaatgccacg
gccagggtgatgaccaataagaagatggtcagcccctaccccaacggagaggcccttagc
accctgccatacgctgggtggaagttaagcccaatggtgcaggctatgtacggaccagag
ctctatgcagttccagggttcccctacccgtctgcggcagcggcggcctccacggcagct
gcgttccgtggtgcccaccttaggggccgggggaggccagtgtacagcgccgtgcgtgcg
gcagtgccgcagcctgccctccctgcctaccctggcgtggtgtatcaggatggtgggttt
tatggagctgcagacttatacggaggctatcctgccgctgcctatcgctttgctcagcct
gctgctgtaaccggggcaactgctgccgctgctgccgcttacagtgacagttatggacga
gtgtacactacagatccctaccacgctctaggtcctgctgctgctgcctatggagtcggt
gccatggtaagagcaccccaacctcaacactacaacaacaggctggaaactgaattatct
tcactttatgctagtttatatcgggctggatacagtaggtttgctccttactaa
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