Coregonus clupeaformis (lake whitefish): 121551715
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Entry
121551715 CDS
T08357
Name
(RefSeq) polypeptide N-acetylgalactosaminyltransferase 13 isoform X1
KO
K00710
polypeptide N-acetylgalactosaminyltransferase [EC:
2.4.1.41
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00512
Mucin type O-glycan biosynthesis
cclu00514
Other types of O-glycan biosynthesis
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
121551715
00514 Other types of O-glycan biosynthesis
121551715
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121551715
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.41 polypeptide N-acetylgalactosaminyltransferase
121551715
Glycosyltransferases [BR:
cclu01003
]
O-Glycan biosynthesis
Mucin-type
121551715
BRITE hierarchy
Motif
Pfam:
Glycos_transf_2
Ricin_B_lectin
Glyco_transf_7C
Glyco_tranf_2_3
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
121551715
NCBI-ProteinID:
XP_041720390
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All DBs
Position
4:10796742..10910632
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AA seq
571 aa
AA seq
DB search
MRRFVYCKVVLTTSLVWVLVDVFLLLYFSECNKCDDRKDRSLLPALRAVILRTHEGPGEM
GKAVVIAKDEQEKMKELFKINQFNLMASDMIALNRSLPDVRLDGCKTKVYTDDLPNTSIV
IVFHNEAWSTLLRTVHSVINRSPRHLLQEILLVDDASERDFLGKKLENYGRTLEVPVRVL
RMEQRTGLIRARLRGAAATRGQVITFLDAHCECTMGWLEPLLARIKEDRRSVVCPIIDVI
SDETFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPLRTPTMAGGLFSIDRT
YFEEIGTYDPGMDIWGGENLEMSFRIWQCGGSLEIITCSHVGHVFRKATPYSFPGGTGQV
INKNNRRLAEVWMDGFKDFFYIISPGVARVGYGDVSSRKALREALQCKPFSWYLENIYPD
SQIPRRYYSLGEIRNVETNQCVDNMGRKENEKVGFFNCHGMGGNQVFSYTADKEIRTDDL
CLDVSRPHGPVVMLKCHQMKGNQMFEYDAEKHTFLHIITQSCLTISRLEDGSWRPTVEYC
NNSPLQAWVLRNFTRLEVFRKLYYSPTDYFL
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcggcggtttgtctactgtaaggtggtgctgaccacttcgctggtctgggtgctggtg
gatgtcttcctgttgctctacttcagtgaatgtaacaaatgtgacgacaggaaggatcgc
tcactgctgcctgctctgagagcggtcatattgcggacccacgagggcccaggggagatg
gggaaggcggtggttattgcaaaggacgagcaggagaaaatgaaggagctctttaagatt
aaccagttcaatctgatggccagtgacatgattgctctcaacaggagtctgccggatgtg
agactggacggttgcaagaccaaggtgtacacggacgatctccccaacaccagtatagtg
attgtgttccacaacgaggcgtggagcaccctgctccgcactgtccacagtgtcatcaac
cgctcgccacgccacctgctgcaggagatcctgctggtggacgacgccagtgagagagac
ttcttgggaaagaagctggagaactatggtcggaccctggaggttcccgtgcgggtcctg
cggatggagcagcggacggggctgatccgggcaaggctgagaggggctgcggccacacgg
ggacaggtcatcaccttcctggatgcccactgtgagtgcaccatgggctggctggagcct
ctgctggccaggatcaaagaggaccggagatctgtggtgtgtcctataattgatgtgatc
agcgacgagacgtttgaatacatggcaggctcagacatgacctacggaggatttaactgg
aagctgaatttccgttggtaccccgtgcctcagagagagatggacaggcgtaaaggggac
aggacactcccactcagaacccctactatggctggagggctgttctctattgaccggaca
tattttgaagaaataggaacatacgatccagggatggacatttggggcggagagaacttg
gagatgtctttcaggatctggcagtgtggcggctcgctggagattattacttgttcccat
gtgggtcacgtgttccggaaggccaccccttacagcttccctgggggcacggggcaagtc
atcaacaagaacaacaggcgattggccgaggtgtggatggacggcttcaaagacttcttc
tatatcatatcaccaggtgtggcccgggtgggctatggagatgtgtcctctcgtaaggcc
ctgcgtgaagctctgcagtgtaaacccttctcctggtacctggagaacatctaccctgac
tctcagatccccaggcgatactactcacttggtgaaatcagaaatgttgaaacaaaccag
tgtgtggacaacatgggcagaaaggaaaatgagaaagttggcttcttcaactgccatggc
atgggtgggaatcaggtgttttcctacacagctgataaggagatccggacagatgacctg
tgtctggatgtgtctcgtccccatggccctgtggtcatgctgaagtgtcatcaaatgaag
gggaatcagatgtttgagtatgatgcagagaagcacacgttcctccacatcatcacacag
tcgtgtctgaccatcagcaggctggaggacggcagctggcgccccacggtggagtactgt
aataatagccccttgcaagcctgggtcctgaggaacttcaccaggctggaggtgtttagg
aagctctactacagccccactgattactttctgtag
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