Coregonus clupeaformis (lake whitefish): 121552301
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Entry
121552301 CDS
T08357
Symbol
psmc6
Name
(RefSeq) 26S proteasome regulatory subunit 10B
KO
K03064
26S proteasome regulatory subunit T4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121552301 (psmc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cclu03051
]
121552301 (psmc6)
Proteasome [BR:
cclu03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
121552301 (psmc6)
BRITE hierarchy
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_5
AAA_16
AAA_2
RuvB_N
AAA_22
PRS7_OB
DUF815
nSTAND3
Prot_ATP_ID_OB_N
AAA_14
AAA_18
AAA_7
AAA_11
RNA_helicase
AAA_3
TIP49
AAA_33
bpMoxR
Mg_chelatase
AAA_25
AAA_24
AAA_28
DUF5906
TsaE
NACHT
Parvo_NS1
IstB_IS21
AAA_17
COG4_N
GAS
ATPase
Motif
Other DBs
NCBI-GeneID:
121552301
NCBI-ProteinID:
XP_041721039
LinkDB
All DBs
Position
36:complement(28254575..28260769)
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AA seq
389 aa
AA seq
DB search
MADTREKGLQDYRKRLLEHKEIDGRLKELREQLKEQTKQYEKSENDLKALQSVGQIVGEV
LKQLTEEKFIVKATNGPRYVVGCRRQLDKSQLKPGTRVALDMTTLTIMRYLPREVDPLVY
NMSHEDPGSISYSEIGGLAEQIRELREVIELPLTNPELFLRVGIIPPKGCLLYGPPGTGK
TLLARAVASQMDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG
RRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH
IELPNEQARLDILKIHSGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRTDHE
YVTQEDFMKAVRKVADSKKLESKLDYKPI
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaccagagaaaagggactccaagattacaggaaaagattacttgaacataaa
gagattgacggacgtttaaaagagttgagggaacagctcaaggaacagacaaaacaatat
gaaaaatctgaaaatgacctgaaggccttacaaagtgttggtcagattgtcggtgaagtg
ctcaaacagctgacggaggagaaattcattgtcaaggcaaccaatggacctcgctatgtt
gttggctgccgcagacaactggataaatcacagctcaaaccaggcactagagtggccctg
gacatgaccaccctcacaattatgaggtatctgcccagagaggtggaccccctggtgtac
aacatgtcccatgaagaccctggcagtatctcctactcagagatcgggggcttggccgag
cagatccgtgaactgagagaggtgattgagctgcccctgaccaaccctgagcttttcctg
agggtggggattatccctccaaagggctgcctgctctacggacctccaggcaccggaaag
actcttctggccagagctgtagccagtcagatggactgtaacttcctcaaggttgtgtcc
agctccattgtggataagtacattggagagagcgccaggctcatcagggagatgttcaac
tacgccagggaccaccagccttgcatcatctttatggacgagatcgatgccatcggtggc
cgaaggttctcagagggcacgtcagctgacagagagatccagaggaccctgatggagctg
ctgaaccaaatggacggctttgacaccctgcacagagtcaagatgatcatggccaccaac
cggcctgacaccctggaccccgcgctgctgcgtcccggcagactggaccgcaagatacac
attgagctgcccaatgaacaggcccgcttggacatcctgaagatccactctggccccatc
accaaacatggagaaatagattacgaagcaatcgtgaagctttcagacggcttcaacgga
gccgatttgcgaaacgtgtgcactgaagcaggtatgtttgcgatccgtactgatcacgag
tacgtcactcaagaggatttcatgaaggcagttcgcaaggtggccgattcgaagaagctt
gaatccaagctggactacaagcctatataa
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