Coregonus clupeaformis (lake whitefish): 121556718
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Entry
121556718 CDS
T08357
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121556718
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121556718
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
U-box
ZapD
zf-RING_6
zf-RING_2
zf-RING_5
Fib_alpha
FliD_N
DUF4455
YscO-like
Spc24
Motif
Other DBs
NCBI-GeneID:
121556718
NCBI-ProteinID:
XP_045074367
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MAENQDQFCCSICLDLLKDPVTTACGHSYCMGCIKECWDQDDLKGVYSCPQCRETFTPRP
NLRKNNMLAEMVEKLKKTGLQAAPPPALCYAGPGDVACDFCTGTRKQKALMSCLACLASY
CETHLQPHYESPAFKKHKLVKATAQLQEKICSHHDKLLEVFCRTDQQCICYLCTMDVHKG
HDTVSAAAERTEKQRQLGMSQHKVQQRFQEREKELKELQQAVESLKRSAQAAVEDSDKIF
TDLIRSIERRRSEVKELIRAQEKAQVSQAEGLLEQLEQEIAELRKISTELEQLSNREDHI
HFLQSYQSLSGTSVSSDLPSIVVRPLQYFGDVSKTVSELREKLEDVLKGEWTKISSTVNI
EDVVLPPEPKTREQFLQYSCQLTLDPNTAHTHLSLSEGNRKVTYTDQEQPYPDHSDRFTN
YCQVLCREGLSGRCYWEVEWSGWCVTAVSYKDISRTGTDGGFGYNNKSWRLECSRGGYLF
RHNNVVTKVSGPQSSRVGVYLDHKAGTLSFYSVSDTMTLLHRVQTTFTQPLYPGFNLFGT
AELVKL
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaatcaggaccagttctgttgctccatctgtctggatctactgaaggatccg
gtgactactgcctgtggacacagctactgtatgggctgtattaaagaatgctgggatcag
gatgatctgaaaggtgtctatagctgtcctcagtgcagagagaccttcactccaaggcct
aatctgaggaaaaataacatgttggctgagatggtggagaaactgaagaagacaggactc
caggctgctccccctcctgctctgtgctatgctggacctggagatgtggcgtgtgatttc
tgcactgggaccagaaagcagaaagccctcatgtcctgtctggcgtgtctggcctcttac
tgtgagactcacctccaacctcactatgaatctcctgctttcaagaagcacaagctggtc
aaagccaccgcacaactacaggagaagatctgctctcatcatgacaaactgctggaggtt
ttctgtcgtaccgatcagcagtgtatctgttatctgtgtacaatggatgtacataaaggc
catgatacagtgtcagctgcagcagagaggactgagaaacagaggcagctggggatgagt
cagcataaggtccagcagagattccaggagagagagaaggagctgaaggagctccaacag
gctgtggagtctctcaagcgctctgcacaggcagcagtggaggacagtgataagatcttt
accgatctgatccgctccattgagagaaggcgctctgaggtgaaggagctgatccgagcc
caagagaaggctcaagtgagtcaagctgaaggactcctggagcaactggagcaggagata
gctgagctgaggaagataagcactgagctggagcagctctcaaacagagaggatcacatc
catttcctccagagttatcagtctctctccggtaccagtgtatcttcagacttacccagc
atcgttgtccgtcctcttcagtactttggagatgtgagtaagactgtgtctgaactgaga
gagaaactagaagacgtccttaaaggagaatggaccaagatctcctctacagtgaatata
gaggatgttgtactgcctccagagcccaagaccagagaacagttcttacaatattcctgt
cagctcacactggacccaaacacagcacacacacacctctctctgtctgaagggaacaga
aaggtgacctatacagaccaagaacaaccatatcctgatcattcagacagattcactaac
tactgtcaggttctgtgtagagagggtctgtctggacgctgttactgggaggtggagtgg
agtgggtggtgtgtaacagcagtctcatataaagacatcagcagaacagggacagatggt
ggatttggatacaataacaagtcctggaggttagagtgctctagaggtggttatttgttc
agacacaataatgttgtgactaaagtatcaggccctcagtcctccagagtaggagtgtac
ctggatcacaaggcaggtactctgtccttctacagtgtctctgatacaatgaccctcctc
cacagagtccagaccacattcactcagcccctctatcctgggtttaatctctttggtact
gctgagctggttaaactgtag
DBGET
integrated database retrieval system
