Coregonus clupeaformis (lake whitefish): 121560959
Help
Entry
121560959 CDS
T08357
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121560959
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121560959
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-RING_2
YscO-like
Fib_alpha
zf-RING_6
ZapD
zf-RING_5
Y1_Tnp
MAP65_ASE1
TelK_muzzle
Spc24
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
121560959
NCBI-ProteinID:
XP_045071061
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MAQQGVLLDQDQFCCSVCLDLLKEPVTIPCGHSYCRSCIEGCWDQDVLKGVYSCPQCRET
FTPRPNLRKNNMLAELVEKLKKTGLQAAPPPALCYAGPGYVVCDFCTGTRKQKALMSCLV
CLASYCETHLQPHYESPAFKKHKLVKATAQLQEKFCSDHDKLLDVYCRTDQQCICYLCTM
DEHKGHDTVSAAAERTEKQRQLGMSQQKVQQRFQEREKELKELKQAVESLKSSAQAAVVD
SDKIFTELIRSIERRRFEVKELIRAQEKAQVSQAEGLLEQLEQEIAELRKRSTELEQLSH
TEDHIHFLQSYQSLSSTSVSSDLPSIVVRPLQYFGDVSKTVSELREKLEDVLKGEWSKIS
TTVNIVDVVLPPEPKTREQLLQYSCQLTLDPNTAHKRLSLSEGNRKVTYTDQFQPYPDHP
DRFTNMYQVLCREGLSGRCYWEVEWSGELVYTAVSYKDISRTGAGSAFGYNNKSWRLECY
RGGYLFRHDNVVTTVSGPQSSRVGVYLDHKAGTLSFYSVSDTMTLLHRVQTTFTQPLYPG
FWLSGTAELVKL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcagggagttctgctggaccaggaccagttctgttgttctgtctgtctggat
ctactgaaggagccggtcaccatcccctgtggacacagttactgtaggagctgtattgag
ggctgctgggatcaggatgttctgaaaggggtctatagctgtcctcagtgcagagagacc
ttcactccaaggcctaatctgaggaaaaataacatgttggctgagttggtggagaaactg
aagaagacaggactccaggctgctccccctcctgctctgtgctatgctggacctggatat
gtggtgtgtgatttctgcactgggaccagaaagcagaaagccctcatgtcctgtctggtg
tgtctggcctcttactgtgagactcacctccaacctcactatgaatctcctgctttcaag
aagcacaagctggtcaaagccactgcacaactacaggagaagttctgctctgatcatgac
aaactactggatgtttactgtcgtaccgatcagcagtgtatctgttatctgtgtacaatg
gatgaacataaaggccatgatacagtgtcagctgcagcagagaggactgagaaacagagg
cagctggggatgagtcagcagaaggtccagcagagattccaggagagagagaaggagctg
aaggagctcaaacaggctgtggagtctctcaagagctctgcacaggcagcagtggtggac
agtgataagatctttactgagctgatccgctccattgagagaaggcgctttgaggtgaag
gagctgatcagagcccaagagaaggctcaagtgagtcaagctgaaggactcctggagcaa
ctggagcaggagatagctgagctgaggaagagaagcactgagctggagcagctctcacac
acagaggatcacatccatttcctccagagttatcagtctctctccagtaccagtgtatct
tcagacttacccagcatcgttgtccgtcctcttcagtactttggagatgtgagtaagact
gtgtctgaactgagagagaaactagaagacgtccttaaaggagaatggtccaagatctcc
actacagtgaatatagtggatgttgtactgcctccagagcccaagaccagagaacagttg
ttacaatattcctgtcagctcacactggacccaaacactgcacacaaacgcctttctctg
tctgaagggaacagaaaggtgacctatacagaccaattccaaccatatcctgaccatcca
gacagattcacaaacatgtaccaggttctgtgtagagagggtctgtctggacgctgttac
tgggaggtggagtggagtggggagttggtttatacagcagtctcatataaagacatcagc
agaacaggggcaggtagtgcatttggatacaataacaagtcctggaggttagagtgttat
agaggtggttatttgttcagacacgataatgttgtgacgacagtatcaggccctcagtcc
tccagagtaggagtgtacctggatcacaaggcaggtactctgtccttctacagtgtctct
gatacaatgaccctcctccacagagtccagaccacattcactcagcccctctatcctggg
ttttggctctctggtactgctgagctggttaaactgtag
DBGET
integrated database retrieval system
