Coregonus clupeaformis (lake whitefish): 121564433
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Entry
121564433 CDS
T08357
Name
(RefSeq) B-cell receptor CD22-like isoform X2
KO
K06467
CD22 antigen
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121564433
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cclu04090
]
121564433
04091 Lectins [BR:
cclu04091
]
121564433
CD molecules [BR:
cclu04090
]
Proteins
121564433
Lectins [BR:
cclu04091
]
I-type lectins (Siglecs)
121564433
BRITE hierarchy
Motif
Pfam:
Ig_3
Ig_2
V-set
ig
I-set
Ig_5
Ig_4
Ig_6
RIFIN
ICAM_N
Lep_receptor_Ig
Ig_C17orf99
SIT
Tmemb_9
PepSY_TM
C2-set_2
Motif
Other DBs
NCBI-GeneID:
121564433
NCBI-ProteinID:
XP_041731696
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MALRTAGSVLVVFLWSVAAVLEQNGWSVTYTTHSICTLKVSSVELSCSYTYPSWYNVIKT
FWFTKVYPMDNYVSVSDDLDYKGRVTYRSDKKNVHTLKITDLRESDSATYKFRFITDQTG
GRYFGDPGVTLSVTDLQVKVTTTWWSTALTCSTTCTLTDNPNPTYIWYRNSKIVQEDSSP
SYSVYINTDDSFYCAVKGINSPAVSVGGHSYFHVTYTHQSICTLKGSSVDISCSYTYPSG
HRVSETNWYTKGKLDEAPQILSPGYGGRVEYLRNMQSDSTLRITDLKEEDSAEYKFRVIT
DQTNWEPTFPGTTLTVTGLQVKVTPPTVTEGQKVTLTCSTTCTLSDNPNPTYIWYKNGHV
TNQSNSLFLNPVSSEDAGRYSCAVEGHEVLHSPEETLTVRYGPKNSSVSVSPSGKIVEGS
TVTLTCSSDANPPVDKYTWYKKNVTSPKASGQSYNITNISSEDSGEYYCEARNKITSKNS
TALMIMVAGKQTSVMTAVVGIIVVVLVLILCLSGLMWFRKKSSKSTSDTRDTADDGQGDS
SPVYDNISGMAMTPTATQTAATVDQDDVYYASVHFSRSKNQEVPLYSTVQLPQPQKQDED
VQYAAVKFNRPSAATQ
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggccttgagaacagcaggaagtgtgttggtggtctttctctggtctgtagcagctgta
ctggagcagaatggctggagtgtgacttacaccactcacagtatttgtaccttgaaggtg
tcatcagtggagctgtcctgctcttacacgtatcccagttggtataatgtcataaaaacc
ttctggttcaccaaagtttatcctatggataattatgtgagtgtgagtgatgacctagac
tacaaaggtcgtgtgacgtaccgtagtgataagaagaatgtccacaccctgaaaatcaca
gacctgagagagagtgactcagctacgtacaagttcagatttataacagatcagaccgga
gggagatattttggtgatcctggagtcactttgtctgttacagacctgcaggtgaaggtg
accactacatggtggtcaacggcactgacctgtagcacgacctgtactctgactgacaac
cccaaccccacctacatctggtacaggaacagtaagattgtacaagaggactcctccccc
tcatactcagtctacataaatactgacgacagcttctactgtgctgtaaaaggcatcaat
tctcctgcagtgtctgttgggggtcacagttatttccacgtgacttacacccatcaaagt
atctgtaccttgaaggggtcatctgtggacatatcctgctcttatacatatcccagtggt
catagagtctccgaaacaaactggtatacaaaaggaaaacttgatgaggcacctcaaatc
ctgagcccggggtatggaggtcgtgtggagtaccttagaaatatgcagagtgactccacc
ctgagaatcacagacctgaaagaggaggattcagctgagtataagtttagagtcataaca
gatcagacaaactgggagcccaccttccctggtacaactctgactgtcacaggtctgcag
gtgaaggtgactccacccactgtgacagagggacagaaggtgacactgacctgtagcacc
acctgtactctgagtgacaaccccaaccccacctacatctggtacaagaacggacatgta
accaaccaatctaacagtctgttcctaaacccagtcagcagtgaggatgcaggcagatac
tcctgtgctgtagaaggccatgaggttctccactctcctgaagagactctcactgtcaga
tatggcccaaagaacagctcagtgtcagtcagtccctctgggaaaatagtggagggcagt
acagtgactctgacctgcagcagtgatgccaacccacctgtggacaaatacacctggtac
aagaagaacgtaacctcaccaaaagcatcaggacagagttacaatatcactaacatcagc
tctgaggacagtggagaatactactgtgaggcccggaataaaataacatctaagaactct
acagctttgatgatcatggtagcaggaaaacaaacatcagttatgactgcagttgtagga
atcatagtggttgttctggttctcatcctctgtctctctggactcatgtggttcaggaag
aagtcctccaaatccacctctgacacaagagacacagcagacgatggacagggagactct
agtccagtgtatgacaacatctcaggcatggccatgacccctactgcaacacagacagca
gccaccgtagaccaggatgatgtttactacgccagcgtccacttctctcgctccaaaaac
caggaagtgcctctgtactccaccgtccaactgcctcaaccccagaaacaggacgaggat
gtccagtacgctgctgtgaaattcaaccgccccagtgctgccacccagtaa
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