Coregonus clupeaformis (lake whitefish): 121571211
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Entry
121571211 CDS
T08357
Name
(RefSeq) RNA-binding protein 4 isoform X6
KO
K13189
RNA-binding protein 14
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121571211
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121571211
BRITE hierarchy
Motif
Pfam:
RRM_1
RRM_5
RRM_7
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
121571211
NCBI-ProteinID:
XP_041738481
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All DBs
Position
8:complement(16798395..16809600)
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AA seq
587 aa
AA seq
DB search
MDKSNTVKLFVGNLALDTTQEELSAIFESYGEVVSCSVLRQFAFVHLQGEGAAERAISEL
NGREFRGRNLVVEESRGRPLHSTKVFVGNLSGMCTTEDLQELFQTFGKVLECDKVKGYAF
VHMENKEEALQAIEALHGTSFKGRPLSVELSKVQPSKQTPTGKIPCVSCGKQGHYAGECP
VGKSSLEQYQSQAAVLAAAAAAAAGLPLQVQQSVHNSVYNTSTFDPTYAALTGLTTGTRT
DSNPVNQAVYGALATQVYGANVANQLYGVQAANQAAALTQAGATQVYASSMNPSHAALYS
QLSQIAASPAAASAAAYSTPVYAHAMANHHHPGAVYLAAHGVEMPTAAAAINQAYALAPA
LYGGAQHAYGHMGMGAMSVSADPSAAIFEAARVQHYFAQGQQVLAEQQNAAAAQAAKSGE
RDRSPLRRSAGSLLPDPVMKPFMYQRAPKQRRPLLPTPAGRAAEEAAEAAEDPMARYYAE
YYQQYQQYQQLQQYQQLQQLQCAYPPPNHHAIAGIPAHAMAGHAHHHGQPGHVTALDAAL
RPVVAASAMVAVPRVYEPPLPPPPNRKEAVLRRAPELSLHTPEPPFR
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggacaagagcaacacggtgaagctcttcgtgggcaacctggctctggacaccacccag
gaggagctgtcggccatctttgagtcgtatggcgaggtggtcagctgcagcgttctccga
cagtttgcctttgtacacctacagggcgagggggctgcagagcgggccatcagtgagctg
aacggcagggagttccgggggaggaacctggtggtggaggagtcccggggcagaccgctc
cactccaccaaggtgttcgtgggcaacctgtcgggcatgtgcaccactgaggatctccaa
gagctcttccagacctttggcaaagtactggagtgcgacaaggtcaaaggctacgccttc
gtgcacatggagaacaaggaggaggctctacaggccatcgaggccctccacggcacctcc
ttcaagggacgcccgctctctgtggagctctccaaggtacagccctccaagcaaaccccc
acagggaagatcccctgtgtgagctgtgggaagcagggccactacgctggggagtgccct
gtagggaagtcctctctggaacagtaccagagccaggcagccgtgttagctgcagccgcc
gctgccgcagccggcctccccctccaggtccagcagagtgtccacaactctgtctacaac
acctcgacctttgaccccacctacgcggcgctgacgggcctcaccaccggcacgcggacg
gacagcaaccccgtcaaccaggcagtgtacggtgccctggcgacgcaggtctacggcgcc
aacgtggccaatcagctctacggagtccaggcagccaatcaggcggcagcgttgacacag
gcgggtgccacgcaggtgtatgccagctccatgaaccccagccacgccgccctctacagt
cagctcagtcagatcgctgccagcccagccgcagcgtccgccgctgcctactccacaccg
gtgtatgcacatgccatggccaaccaccaccacccaggggccgtctacctggcagcccat
ggcgtagagatgcctacagccgctgctgccatcaaccaggcctacgccttggcgccggcg
ctgtatgggggcgcccagcatgcctacggccacatggggatgggagccatgagcgtgtca
gcggacccgtcggcggccatttttgaggcggcgagggtgcagcactacttcgcccaggga
cagcaggttctggccgagcagcagaatgcggcggcggcacaagcagcgaagtccggggaa
agggaccggagtcccctgaggcgctcggcggggtccctgctgcccgaccccgtcatgaag
cccttcatgtaccagagagcgcccaagcaacgccggccactgctccccacccccgctggg
cgagctgcagaggaggcagcggaggctgcagaggaccccatggctaggtactatgcagag
tactaccagcagtaccagcaataccagcaactccaacagtaccagcaactccaacagctc
cagtgcgcctacccgcctcccaaccaccacgccatcgccggcatccctgcccacgccatg
gcgggccacgcccaccaccacggccagcccggtcacgtcacggcgctggacgccgccctc
aggccagtggtggctgcctccgccatggtggcagtgcccagagtgtatgagccgccgctg
ccgccgcctccgaaccgcaaggaggccgtcctccgccgagcccccgaactctcccttcac
acgcctgagccccccttccgatag
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