Coregonus clupeaformis (lake whitefish): 121572065
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Entry
121572065 CDS
T08357
Name
(RefSeq) ubiquilin-4-like isoform X1
KO
K04523
ubiquilin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121572065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121572065
03051 Proteasome [BR:
cclu03051
]
121572065
Membrane trafficking [BR:
cclu04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
121572065
Proteasome [BR:
cclu03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
121572065
BRITE hierarchy
Motif
Pfam:
ubiquitin
STI1-HOP_DP
UBA
Rad60-SLD
Ubiquitin_5
YukD
HOIP-UBA
CUE
Rad60-SLD_2
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
121572065
NCBI-ProteinID:
XP_045077955
LinkDB
All DBs
Position
8:complement(42057063..42068007)
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AA seq
631 aa
AA seq
DB search
MADNGGEDPVNNNNNTTVSSEGTIIKVTVKTPKDKEEIAISEDASVTQFKEEISRRFKAK
QDQLVLIFAGKILKDGDSLNQHGIKDGLTVHLVIKTAHKAGDGASFSTSGTTQVGSSSGS
SSGPSSAAQSSTVGSTGGPASAPPQTPNILTGFGDLSSLSSMGMGSANFMELQQQMQSQL
MSNPEMLSQIMENPLVQNMMSNPDLMRQMIVANPQMQQLMERNPEISHMLNNPELMRQTM
ELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAARDQFGNNPFSAL
GGNSDGGVQPSRTENREPLPNPWGPPSSTNPSEGGGGTGTTGSTTGSTTPSVSNPLGVNS
ASLGNGMFSSPGMQSLMQQISENPQLMQNMLSAPYMRSMMQSLAQNPDMASQVLMNNPLF
AGNPQLQEQFRSQLPVFLQQMQNPEALSVMTNPRAMQALLQIQQGLQTLQTEAPGLMPSL
APGGLPGGLPGGLPGGLPGGLPGGLPGGLPGGLPGGLPGGLPGGLPGGLPGGLPGGIPTT
SLSIGGVAPENPASSPSAGTNPAQQLMMQQMLQMFAGGNASSQSPEVQFQQQLEQLSAMG
FINREANLQALIATGGDVNAAIERLLGSQPS
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacggcggtgaagatcctgttaataacaacaataatacaacggtctcttcg
gagggaactattattaaggttacagtcaaaaccccgaaagataaggaagaaatcgccatc
tcggaagatgcctctgtcactcagtttaaggaggagatctcgcggaggttcaaagccaag
caggatcagttggttctgatctttgcagggaagatcttgaaggacggggactcgctcaac
cagcacggcatcaaggacggcctgacagtccacctggtcataaagacggcacacaaggca
ggagatggcgctagtttctccacctccggcaccacccaggtgggcagcagtagtggcagc
tcctccggccccagttctgcagcccagtcctccacagtagggtccactggaggccctgcc
tcggcacccccacagacccccaacatactgaccgggttcggtgacctgtccagcctgagc
agcatgggcatgggctcagctaacttcatggagctgcagcagcagatgcagagccagctg
atgtccaacccggaaatgctgtcccagatcatggagaaccccctggtgcagaacatgatg
tccaacccagacctgatgaggcagatgatcgtggccaacccacagatgcagcagctgatg
gagcgcaacccagagatctcccacatgctcaacaaccccgagcttatgagacagaccatg
gagctggccaggaaccctgccatgatgcaggagatgatgcgtaaccaggaccgggcgctt
agcaacctggagagcatcccggggggctacaacgccctgcgcaggatgtacacagacatc
caggaacccatgttcagcgcagcacgagaccagtttggaaacaaccctttctcagccttg
gggggcaactctgacgggggggtgcagccgtcgaggacagagaaccgggagccactgccc
aacccctggggccctcccagctccaccaacccctctgagggtggagggggaacgggcacc
acaggctctaccactggcagcaccacccccagtgtgtccaaccctctgggcgtcaactct
gccagtctgggaaacggcatgttcagcagtccgggcatgcagagtctgatgcagcagatc
tcagagaacccccagctgatgcagaacatgctgtctgctccctacatgcgcagtatgatg
cagtctcttgcccagaacccagacatggcctcccaggtgttgatgaataaccccctgttt
gctggaaacccccagctgcaggaacagttcaggagccagctgcctgtcttcctgcagcag
atgcagaacccagaggctctctctgtgatgaccaacccccgggccatgcaggctctcctt
cagatacaacagggcctacagacgctgcagacagaggcaccgggactcatgcccagtttg
gcaccaggcggtctaccaggtgggctgccaggcggtctaccaggtgggctgccaggcggt
ctaccaggtgggctgccaggcggtctaccaggtgggctgccaggtgggctgccaggcggt
ctaccaggtgggctgccaggtgggctgccaggcggtctaccaggtggaatacccacaacc
tccctgtccataggaggtgtggctccagagaaccctgcctcttcgccgagcgccgggaca
aaccccgcccagcagctgatgatgcagcagatgctccaaatgttcgcaggagggaatgcc
tcgagccagagcccggaggtgcagttccagcagcagctggagcagctgagcgctatgggc
ttcatcaaccgagaggccaacctgcaggccctcatcgctacaggaggagatgtcaacgct
gccatcgagagactgctgggctctcagccctcataa
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