Coregonus clupeaformis (lake whitefish): 121576016
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Entry
121576016 CDS
T08357
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121576016
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121576016
BRITE hierarchy
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-C3HC4
DUF4407
zf-RING_10
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
121576016
NCBI-ProteinID:
XP_041745251
LinkDB
All DBs
Position
1:complement(77082517..77105277)
Genome browser
AA seq
733 aa
AA seq
DB search
MADTESKSKSKPVQKLCCTVCSSVLKKDKPATCGHSVCASCLGEKGKGCPQCLQSSGKPE
TAPVEQNGTMNGIVAESPPVIKTKEEKEKDIEAQDSKTAGETMIQEDLKEAEDPKKPEES
MIQEDLKEAEDPKKTEETMIQEDLKEAEHPKKTEETMIQEDLKEAEDPKKTEEEKRKEGD
PPQPAEELKEDVKNGVNEKSKEEKSKEENAKEEEVKVEPLGSDDVVCDSCMETSPCRALK
SCHTCLVSYCEAHLRPHLENPKFQNHRLVEPLRDIERRTCESHKWPLELFCCADAVCVCQ
DCVTEDHRGHNTVPVVEARRTIERELRDKQTEMVKTVAAAENAINQLQVNTVFFENSVTE
VREVIDCQFTELQAAVERAKREVTEILEGEKKQALRQAEGIKVHLEKKCTELKKTQEQLK
KLSKNKNDVDLLQEYSEWKKDSPDMTLPGVYIGLMDQLNSFSRVIVTSTQELCEKLLSNY
IETLKESCNNDKIIKTTVHEIIADKHMTVPDPKTRDDFLKYAAPVSFDADTAHKFLRLTE
ENRKVTNTTPWQQPYPNVLERFENWRQVLATESFYVGRHYFEVEMSGEGTHVGLTYKSID
RKGPKNNSCITGNDFSWCLQWNGRSFSAWHSDVETPLKVEKFTRIGVYVDYSCGLLAFYG
VDDGVGMTLIHKYKAEFLEPLYPAFWLSKKENVVILVGPGEPLTPKISSPPNSPPNTDVA
PSSRFTVSSVVDQ
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcagacacagaatccaagtcaaaatccaaaccagtccagaaactctgctgcactgtg
tgttccagtgttctcaagaaggacaagcccgctacctgtggccactcagtctgtgcttcc
tgcttgggggagaaaggtaaaggctgtcctcagtgtctacagagctctggcaagcctgaa
actgcacctgtggaacagaatggaacgatgaatggaatagtggccgagtctccaccggtg
atcaaaaccaaagaggaaaaggaaaaggacatagaagcccaggattcaaagaccgcaggg
gagacaatgatacaggaagacctgaaggaagcagaggaccctaaaaaaccagaggagtca
atgatacaggaagacctgaaggaagcagaggaccctaaaaaaacagaggagacaatgata
caggaagacctgaaggaagcagaacaccctaaaaaaacagaggagacaatgatacaggaa
gacctgaaggaagcagaggaccctaaaaaaacagaggaagagaaaaggaaagagggtgac
cctccacagcctgcagaggaattgaaagaggatgtgaagaatggggtgaacgagaaatca
aaggaagagaaatcaaaagaggagaacgcaaaggaagaagaggtgaaagtagagcctttg
gggtccgatgatgttgtgtgtgactcgtgtatggagacgagcccgtgcagggccctaaag
tcgtgccacacctgccttgtgtcctactgcgaggcccacctcaggccccacctggagaac
cccaagttccagaaccaccgtctggtggagccgctgagggacatcgagagacggacctgt
gagagccacaagtggcccctggagctgttctgctgtgctgatgctgtgtgtgtctgtcag
gactgtgtgacagaagaccacaggggacacaacactgtgcctgtggtagaggcgcgcaga
accatagagagggaactacgagataaacaaacagagatggtgaaaacagtggcagcagca
gagaatgccatcaaccaactccaagtcaacactgtcttctttgagaattcggtgacggag
gtccgtgaagtgattgactgccagtttacggagctgcaggctgcggtggagcgggccaag
agagaggtgacagagatcctggagggagagaagaagcaggctctcagacaggccgagggg
atcaaggtacacctggagaagaagtgcactgagctgaagaagacacaagagcagttgaaa
aagctctcgaagaacaagaacgacgtggacctcctacaggagtactctgagtggaagaag
gacagccctgacatgaccctacctggggtctacatcggcctcatggaccagctcaactcc
ttcagcagagtgattgttacctccacacaggagctgtgtgagaagctgctgtccaactac
atagaaacactcaaagagagctgcaacaatgacaagattataaaaaccacagtccatgaa
ataattgcagacaaacacatgactgtgccagacccaaagacgcgggatgacttcctaaag
tatgccgctcctgtgagttttgacgcagacacagcccataagttcctgcgtctgactgag
gaaaacaggaaggtgaccaacaccacaccctggcaacaaccgtaccccaatgtccttgag
cgctttgagaactggcgccaggtactggccacagagagcttctatgtcggtcgacactat
ttcgaggtggaaatgagtggtgagggcacgcacgtcggactcacctacaagagtatcgat
cgcaagggcccaaagaacaacagctgcattaccggcaatgacttctcatggtgtctacaa
tggaatggccgcagcttctctgcctggcacagtgatgtggagacccctctgaaagtggag
aagttcacacgtattggggtctatgtggactacagctgtggcctactggccttctatggg
gtggatgatggcgtcggcatgaccctcatccacaaatacaaggctgagtttctagagccc
ctctacccagccttctggctgtcaaagaaggagaacgtggtaatacttgttggacctggg
gagccactgacaccgaaaatctcctctccccctaactcacccccaaacaccgatgtagca
ccctccagccgtttcacagtgtcttctgttgttgatcagtga
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