Coregonus clupeaformis (lake whitefish): 121578433
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Entry
121578433 CDS
T08357
Symbol
tnfrsf1b
Name
(RefSeq) tumor necrosis factor receptor superfamily member 1B isoform X1
KO
K05141
tumor necrosis factor receptor superfamily member 1B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
cclu04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121578433 (tnfrsf1b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
121578433 (tnfrsf1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
cclu04050
]
121578433 (tnfrsf1b)
04090 CD molecules [BR:
cclu04090
]
121578433 (tnfrsf1b)
Cytokine receptors [BR:
cclu04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
121578433 (tnfrsf1b)
CD molecules [BR:
cclu04090
]
Proteins
121578433 (tnfrsf1b)
BRITE hierarchy
Motif
Pfam:
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
121578433
NCBI-ProteinID:
XP_041748745
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All DBs
Position
12:complement(47179802..47190675)
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AA seq
496 aa
AA seq
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MILRTVRGILTVRILLAIMVKPVENTLYTQPYTPDSDGTCRNKTAEYYNTDVNLCCSKCT
SGTRRKVECSSTSDTACEPCPSGQYSGTFNYFPKCFRCPKCLADKGLQYVQKCSRTTKTQ
CACKTGMYCVLDQHPECQECASYTRCKPGHGVSVEGTTAGQEARTAESDVQCAPCPNGTF
SDQHSYTQICQHHTDCVCQGRDVLTYGNATSDAVCGPKVSGPLVCIFQTTTPPSPPTTMP
PSGTGHTTPSLQSMHMSTLPTNLGSKLTSSPSEPLAIAPTEEKPPGFDLGIVAGAIGGVM
FLLLIIGTIIYKKAFTKSIRVSSTEDINGNSEKEAIKFDCDRPMVLQNRSFNTTYQEQRC
LLGKGDCSNVSQAETQQEASRTCSGSGCFNSLEGLPIGPAQSTLPQPSIQASTPQPSPQS
TSSLASIPLVNVNITVTYPVNIGNGLCSTPTSTHIDLPQADPVAHLSREEEVYVNMPQQE
GSKEARTAVQEIGNDV
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgatactaaggactgtacgtggcattcttacagtaaggattcttctagcgatcatggtg
aagcctgttgagaacacgttgtacactcagccatacacaccagactctgacggaacctgc
cgcaacaaaacagctgaatactataacacagatgtaaacctgtgctgcagcaagtgtact
tctgggacacggcggaaagttgaatgcagctctacctcagacacggcgtgtgaaccatgt
cctagtggccagtacagcgggacctttaattacttcccaaaatgcttcagatgccccaag
tgtttagcagacaaaggcctgcagtatgtccagaagtgctccagaaccaccaagacccag
tgtgcgtgcaagactgggatgtactgcgtactggaccaacacccggaatgtcaggagtgt
gccagttatacacgctgcaagcctggccacggggtctctgtagaaggtactacagctgga
caggaagccaggacagcagagtcagatgtgcaatgtgcaccatgccccaatggaaccttc
tctgaccagcactcctacacccagatctgccagcaccacacagattgtgtgtgtcagggg
agggacgtactgacttacggtaacgccacctcagatgcggtgtgtggaccgaaggtaagt
ggaccactggtctgcatcttccaaaccaccacacctcccagcccaccgaccacaatgcca
ccctctggtacagggcataccacaccaagtctacagagcatgcatatgtctacactacca
accaacctaggctcaaagctgacatctagtccctctgagccactggccatcgctccaaca
gaagaaaaaccaccaggctttgaccttgggatagttgcaggtgctatcggaggtgttatg
ttcctgctgctgatcataggcactatcatttacaagaaagccttcactaagtccatacgt
gtatcttctacagaagatataaatggaaattctgagaaggaggccattaaatttgattgt
gacagaccaatggttcttcagaacagatcattcaacaccacatatcaggaacagcggtgt
ctgctgggaaaaggagactgcagtaatgtcagtcaggcagagacccagcaggaagctagt
aggacctgctcagggtcagggtgcttcaacagcttggagggcctgccaataggcccagcc
cagtccacccttccacagcccagcatccaggccagcaccccccagcccagcccccaatcc
accagctctctggcatctatccccctagttaatgtcaacatcactgttacctaccctgtg
aacataggaaatgggttatgctccacacctaccagcacccacatagacttaccacaagct
gaccccgtggcccatttatcaagggaggaggaggtgtatgtgaacatgccacagcaagag
ggcagcaaagaggcacgtacagcagtacaggagattggaaatgatgtatga
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