Coregonus clupeaformis (lake whitefish): 121579288
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Entry
121579288 CDS
T08357
Name
(RefSeq) serine/arginine-rich splicing factor 7-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03040
Spliceosome
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121579288
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121579288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121579288
Spliceosome [BR:
cclu03041
]
Common components
Common spliceosomal components
SR proteins
121579288
BRITE hierarchy
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
121579288
NCBI-ProteinID:
XP_045080269
LinkDB
All DBs
Position
13:34149581..34161485
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AA seq
265 aa
AA seq
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MSYSSSRSSSRNTDCKVYVGDLGNGAAKGELERAFSYYGPLRSVWVARNPPGFAFVEYED
PRDAEDATKGMDGKVLCGARIRVELSTGMSRKSRHDRPSRRHFDPNDRCYQCGENGHYAY
DCYRFSKRGGGRRSRSRSRSRSRGRRYRSRSRSNGRDRRYRSPSYSKRRSSRSGSPARSK
SRSPVRRSSRSPVRRSRTPVRRSRTPVRRAASRSRSRSRSRSVSRPRARSVSRSRSRSKS
RSATAKRDSRSRSPSQRKSPTPDAD
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgtcctactcgtcgtcacgaagctcctcgcgtaacactgactgcaaggtgtatgtgggt
gacctaggcaacggtgctgccaagggggagttggagcgggcattcagctactatggacct
ctgcgcagcgtctgggtggccaggaacccacctggctttgcctttgttgagtacgaagat
cccagagatgctgaggatgcgacgaagggcatggacggcaaagtgctctgtggtgcccgc
ataagagtggagctgtcaacaggcatgtctcgcaagtcacgccacgaccgccccagccgc
cggcacttcgaccccaacgaccgctgctaccaatgtggcgagaacggccattatgcatat
gattgctatcgctttagcaagagggggggcggccgccgcagcaggtcccgctcacggtca
aggtccaggggaaggcgttaccgctcacgcagccgaagcaacggccgcgaccggcgttat
agatccccatcatactcaaagcgcagaagcagtagatctggatccccagcacgatccaag
tccagaagtccagtgcgcaggtcatccagaagtcctgtgcgcagatccaggaccccagtt
cgtcggtccaggactccagtgcgcagagcagccagtcgctcccgatctcgctcccgttcc
cggtcggtgtcccgccccagggcgcgcagcgtctccagatctcgctcccggtccaagtcc
cgctccgccaccgccaagagggacagccgatccaggtctccgagccagaggaaaagccct
acacctgatgccgactga
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