Coregonus clupeaformis (lake whitefish): 121579415
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Entry
121579415 CDS
T08357
Name
(RefSeq) rho GTPase-activating protein 7-like
KO
K20632
deleted in liver cancer protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121579415
Membrane trafficking [BR:
cclu04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121579415
BRITE hierarchy
Motif
Pfam:
RhoGAP
START
SAM_2
Motif
Other DBs
NCBI-GeneID:
121579415
NCBI-ProteinID:
XP_041749931
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All DBs
Position
13:complement(19418383..19495344)
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AA seq
1109 aa
AA seq
DB search
MAHTVKTPLRRSFSEHVKVSTNKAWDVFWKSAREKRLWEIEAKEACDWLRAAGFPQYVQL
YKDCRFPIAIDWVKSDHGFLDKDALDSLCRRLSTLNKFVELRLELGRSKRRGEGSEDEVP
CAISTKWAYERQTRSWRRLEGMGFLHSPDSQDMSLCYANDHHEVYSLHSTSSTESEGREC
PKTTTDDQETSRSLSRCSSINKIPSLDTSFSRPPSPGGETPSFSSTEERFLDKPPRKKGP
SLLRKMEKLRLRGTFNLRSPAHSGHSRARLVISGPVLQESLDVEYRLRRLQCLDISTLQD
RDRDMDRPDSQASSSPSSPHSGSSSPSPSESSSTVSTPSPITRVRSNYNRTVRVREQNQV
GLHRGPVREHQDYKNDRNNHESLVFQIPQGHKPGTFPTALTHNNILLPIDNTSVNWRTGS
FHGYRGRRSRGSAGDKNKNSACCSSLASLDHRASIYDNVPIGQVIGQEVEHHGEAETGEI
SENDEVFSALDSVMERIIGLQQLVNTWTDKLSEDSDSDSNRRSTPSPCPLSSSNHIHLEV
KEAEELGPGAMEREGEGDEESLEKEFADGDDPDAQSPTCSIRRSQHHWSSEQSLPSVAPS
SSGVEAQPVSQLHLLQKLSLLKLTALMDKYSPSSKQGWNWTFPKPPRKTKAPEFKGSRVF
GVPLLHSVQQTGEPLPPSILKAIIYLRTECLGQVGLFRKSGVKSRIQYLRYMVEADPEAV
SYEGQSAFDVADMVKQYFRDLPEPVISSKLCESFLHIYQYFPKDQQFCAAQAAIFLLPDE
NREALQTLLLFLRDVVCCVDENQMTPTNIAVCLAPSLFHLNTLKREDNTARLSHRKYSLG
RPDQRDLSENLAATQGLAHMVTESLRLFKLPEFWPGQSVSKPSEEALWVDWGRSSPSQGG
EEEQDERARLDQTTQHLLREAREKSRGWESCSGPDNVDLVFKKVDDGWPLRLWKGSVEVD
APQKEALQRVLREQGLWEKTLKQSAVVQTLTKDTEVYRYLLQGLGPRPPQEYLLLRTWQS
DLSAGLAYVSAVSTEHREAPMEGVRAHVLSCLYLVEPLGAKRSRLTHLCRTDTRGRSQEW
HNRVSGHLLASNLLAIRDSFRPDHRQTKI
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atggctcatactgtgaaaaccccactgcggaggtccttcagtgagcacgtgaaagtctct
accaacaaggcttgggatgtattctggaagagtgctagggagaaaaggctttgggagatc
gaagcgaaggaggcttgcgattggctgagagcggccggcttcccccagtacgtgcaatta
tacaaagattgcaggttccccattgctatagactgggtaaagagtgatcacggttttctg
gataaggacgcgcttgattccctctgcaggagattaagcactttaaacaaatttgtggag
ctgaggctggagctgggcagatcaaagagacggggggagggatcagaggacgaggtgccc
tgtgccatcagcaccaaatgggcctatgagaggcagacaaggagctggcgtcgcctggag
ggaatgggcttcctacattcaccggatagccaggacatgtccctgtgttacgccaatgac
caccacgaggtctactccctccacagcaccagcagcaccgagagcgagggccgtgagtgc
cccaagaccaccactgatgaccaggagaccagcaggagcttgtctcgctgctcctccatc
aacaagatcccgtccctagacacgtcatttagcaggcccccctccccagggggtgagacg
cccagtttcagcagcactgaggagcgcttccttgacaagccccccaggaagaagggtccc
agtctgctgaggaagatggagaaactgcgtctgaggggcacgttcaacctccgctcccct
gcccacagtggccacagcagggccaggctggtcatctctggccccgtgctccaggagagt
ctggatgtcgagtacaggctgagacggcttcagtgtctggacatctccaccctgcaggac
agggatagggatatggaccggccggacagccaggcctcctcctcgccttcctccccccac
tcgggcagcagcagccccagcccttcggagagcagcagtactgtcagcacccccagcccc
atcaccagagtacgcagcaactacaatcgaaccgtcagggtccgagaacagaaccaagtg
ggactccacagaggcccggtccgagagcaccaggactacaagaacgacaggaataaccac
gagagcctggtcttccagatccctcaggggcacaagccaggcacgttccccacagccctc
acccacaacaacatcctgttgcccatagacaacacctccgtcaactggaggactgggagt
ttccacgggtaccgtgggcgacggagcagggggagcgcaggggacaaaaacaagaattcc
gcctgctgcagctccctagcctcattggaccaccgagccagtatctatgacaatgtgcca
ataggtcaggtgattggccaggaggtggagcatcacggggaggcggagacgggggagatc
agcgaaaacgatgaggtcttctcggcgctggacagtgtgatggagcgtatcatcggcctg
cagcagctcgtcaacacctggacagacaaactgtcggaggacagcgactcagactctaac
cgccgctccacaccctcgccctgccccttgtcctcctccaatcacatccacctggaggtc
aaggaggcagaggagttggggccgggagccatggagcgtgagggtgaaggggatgaggag
agcctagagaaggagtttgcggatggagatgaccctgatgcacagtcaccaacatgcagt
atcagacggagccagcaccactggtccagcgagcagagtcttccctcagttgcccctagc
agctcaggagtcgaggcccagcctgtttctcaactccaccttctgcagaaactctccctg
cttaaactcactgctctcatggacaagtactccccctccagcaagcagggctggaactgg
acattccccaagcctccgaggaagaccaaggccccagagtttaagggcagcagggtgttt
ggtgtacccctcctccacagtgtgcagcagacaggggaaccactaccccccagcatcctc
aaggccatcatttatctgaggacagagtgtctcggtcaggtgggtctgtttcgtaagtca
ggggtgaagtctcgtatccagtacttgcgttacatggtggaggcggacccagaggccgtg
tcctacgagggccaatcagcgtttgacgtggctgatatggtgaagcagtacttcagagac
ctaccagaacctgtgatctccagcaagctctgcgagtccttcctgcatatctaccaatac
ttccccaaagaccagcagttctgtgcggcccaggcagccatcttcctcctgcctgatgag
aaccgtgaggccctgcagacactcctcctcttcctccgagacgtggtgtgctgcgtggac
gaaaaccagatgacccccaccaacatcgccgtgtgcctggccccctccctcttccacctc
aacaccctgaagagagaggacaacacagccaggttgagccacaggaagtacagcctgggt
aggcctgaccagagggaccttagtgagaacctggctgccactcagggcctggcccacatg
gtgactgagtccctgcgcctcttcaagcttccagagttctggccgggccagagtgtgagc
aaacccagtgaggaggctctctgggtggattggggtcggagttcgccctctcagggtggg
gaggaggagcaggatgagagggccagactggaccagaccacccagcacctgttgagagag
gccagggagaagagtagaggctgggagtcctgctctggaccagacaacgtggacctggtt
tttaagaaggtggatgacggctggcctctgcggttgtggaagggctctgttgaggtggat
gccccacagaaagaggccctccagcgggtcctgagggagcagggtctctgggagaagacc
ctcaaacaatctgcagtagtccagaccctgaccaaggacaccgaggtctaccgctacctc
ctgcagggcctgggaccccggccgccacaggagtacctgctgctgaggacctggcagtca
gacctgtcggctggtcttgcttatgtgtcggctgtgtctacagagcaccgtgaggccccc
atggagggggtgagagcccacgtcctctcttgtctctacctggtagaacccctgggggcc
aagaggtcccgacttacacacctctgtcgtacagatacaaggggccggtcccaggagtgg
cacaacagagtgagtggacacctactggcttccaacctcctggctatcagggactccttc
agacctgaccacagacagaccaagatctga
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