KEGG   Coregonus clupeaformis (lake whitefish): 121579462
Entry
121579462         CDS       T08357                                 
Name
(RefSeq) lysine-specific demethylase 6B-like
  KO
K11448  lysine-specific demethylase 6B [EC:1.14.11.68]
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cclu03036]
    121579462
Enzymes [BR:cclu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     121579462
Chromosome and associated proteins [BR:cclu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    121579462
Motif
Pfam: JmjC KDM6_C-hel KDM6_GATAL
Other DBs
NCBI-GeneID: 121579462
NCBI-ProteinID: XP_045080354
LinkDB
Position
13:40601551..40621061
AA seq 1863 aa
MYHPAEQYSGRNTRDSYPAGGPHRGTWAPVNSRPWGPSNRYNGGINQSQHLNKIYNDRGA
RPSFHSQGRGPQRNQRPAIRPWAQKDQAYETQGWHQDSPRSFQNHGRNQGGYQTGPGEPY
TIWDSYNNQPPRYGGPHQHQRPRDPPGDLGSPAERWAASDRSRAFQGRMIDQGPGPWKRP
PPHKHHRGQPPHRSPPSQHSPPPKEDCPAKRSRTSGPEQPSHRGSKHLSGPDQPQSPPHY
LPPKQGFWNQSYDRPGPRTHAERRTSSTELQESTKSRLGRLNYSTHHSTHTPVPQVPFNG
QGPPPSSYPRHPPPSHPCGGSRPPHHGSRVEVDGQSQPPSSPADHTGVPYSQHHQRPPSP
SSVPQHNPPAPRSHRQQRDQTPSQLSATEPPHRNSSHRDGGSTAPSSSSPSGLSSSTTPS
KASGKKYPPPNQRNPDTGSGTPRKRGPRTPSPSPTPPPLSASRTGLGSEPQTPPSSPQDR
PIVNNNIPTINNNRPTVNNNRHTTNKPGLQPHGHKRTERNHKDKERRAERGEVGKREPTR
ERKMEERKRRKEKREKRGDGVKNKTHKGEEVRDKVERKNKKEEERKTEKREESLRAKKLV
KAEMGCSKSLTPSVRPSSPKTQSGSRVPGKPGQPSQTPSTPGKHRHREKGQGRGGTSYDH
SSPNTSIPPAGPPAARPCQPSPSPHPSKHKKSERGGTLNKSNPAQPKPPVKGSPLLACPP
PTTTNNNNISKTSKTSHQPTSPPKPSKCSTERKADSTTSTLSSKTAAAPTVAGSGGSIPS
QQSQTETRGVCPEGGVLRAPDLQPAAGVGSVEELGDNPPASPPVLSWQGSPASALSEEEE
EEEQGGVMRRPVLQPSPTHSPSLSPPHGNSEGLNEKAEGVSEGRGADELRHSDLAKLYGL
PDTPNGVEEEEDEEEEDSSGDTSSSSLLPRRPHLHQTGVADVFKSLASFLGGQRYTYRGG
PFGRPPPSSMGGVKYSSSLAMDPETNCQDQQCPSPTSDSTTPPRLTTQSSTHTTSDPPSK
PRPPVDLNQPQLSVGERTKQKHARLEEIQNERKKERTKCVDSGETAGSLSAELRLTTTHR
LPATTKEERGQREVRRQTGRKRLQSGADGNREGEGKRKRRKQYNSVSNHQSGGNEKKKME
EKSERKSASSITLSSSTPHPSSPVKLFKDTKKSRQIQGNLGLQSKDIQGQKDKAHTGNTE
QGAQSTERKEERGSEPETITSTPGSNTDTVATATSTSTFNTSSTVTTSPTPTPAPSAAPV
RRNPCPLAAADFLKLKALSMGPPKELKIRLIKVESGDRETFIASEECRIPLGEVSIRHTA
SEVIRACKGAKVKGKFRESYLLPAFSVKPVLSTNPPIPREKLNPPTPSIYLESKRDAFSP
VLLQFCTDPKNPVTVIRGLAGSLRLNLGLFSTKSLVEANAEHAVEVRTQVQQPADENWDA
TGSAQTWPCESSRSHTTIAKYAQYQASSFQESLQEEKDSEDEDEEEENETSSSDPSTTPA
SGTSKTSPTTVASKANPTVVASKVGPTPIANTLRPEAKSTGKIIKFGTNIDLSDPKRWKP
QLQELLKLPAFMRVEFNGNMLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNIN
IGPGDCEWFAVHEHYWEHINNFCEKHGVDYLTGSWWPVLEDLYRSNIPVYRFIQRPGDLV
WINAGSIHWVQAVGWCNNIAWNVGPLNSYQYQLALERFEWNEVKKVKSIVPMIHVSWNVA
RTIKITDQETYKMVKHCLLQSIKHIQIQRDRLVAAGKKISYQSRVKDEPAYYCNECDVEV
FDLLFVTSESGNRKTYMVHCEDCAGNVSKSPSLAGVVVLEQYRMEELMRTYDSLCVTPSP
CSK
NT seq 5592 nt   +upstreamnt  +downstreamnt
atgtatcacccagcagagcagtattctgggcgtaacaccagggactcctaccctgctgga
ggacctcacagaggaacatgggcccctgtcaacagtcgcccctggggcccttcaaacagg
tacaatggcggaatcaaccaatcccagcacctaaacaagatttataatgacaggggggcc
aggccatccttccattcccagggaaggggccctcagcggaaccagagaccagcaatacga
ccctgggcccagaaagaccaggcttatgagacccagggctggcaccaggactccccacgt
tcatttcaaaaccatggccgcaaccaggggggctaccaaacaggaccgggggaaccctac
accatctgggactcctacaacaaccagcctcccaggtatgggggtccccaccagcaccaa
cggcccagagatccccccggagacctgggctccccagcagagaggtgggccgcctcagac
cgctccagggccttccaaggtaggatgatagaccagggaccaggaccatggaagcgccca
cccccccacaagcaccaccgtggccaacctccacaccgctccccaccctcacagcactcc
ccaccccccaaggaagactgccctgccaagaggagcagaacctctggccctgagcagccc
tctcaccgtggctcaaagcatttatctggaccagaccagccccaatcaccaccccactac
ctccctcccaaacaaggcttctggaaccaatcatatgacagacctggtcctcgcacccat
gctgagaggaggacctcgtctacagagttacaagaatccaccaagtcaagattagggcgt
ctcaactacagtacacatcattctacccatactccagttccccaggtccccttcaatggt
caaggcccccctccttcctcctatccccgccatcctcctccatcccatccctgtggcggc
agcagacccccccaccatggatccagagtggaggtggatggccagtcccagcccccctcc
tcaccagcagaccacaccggcgtgccttacagtcagcaccaccagcgtcccccatcaccc
tcctcagtacctcagcacaaccccccagccccacgctcccacagacagcagagggatcag
accccctcccagctctctgctacagagcctccccaccgcaacagcagccacagagatgga
ggctccacagccccgagctcctccagcccctctggcctctccagctccaccactcctagt
aaggccagtgggaagaaataccctccacctaatcagaggaatcctgacactggctctggc
acaccccgtaaacggggaccaaggaccccctcacctagtcccacacctccccctctctct
gcctcccgcacagggctaggctcagagccccagaccccacccagctctccccaggacagg
cctattgtcaacaacaacatacctactatcaacaacaacagacctactgtcaacaacaac
agacatactaccaacaagccagggctgcagcctcatggacacaaacggacagagaggaac
cataaggataaagaaaggagagcagagagaggcgaggtgggaaagagggaaccaacgagg
gagaggaagatggaggagaggaaaaggagaaaggagaaaagagagaaaaggggggatggg
gtgaagaataaaacccataaaggagaagaggtgagagacaaggtggagagaaaaaataag
aaagaggaagagaggaagactgagaaaagggaggagagccttagggctaaaaagctggta
aaagcagagatgggatgctcaaagtccctcactccatcagtacggccttcctcccctaag
actcagtctggatctagggttccagggaagccagggcaaccctcccagacaccatccacc
cctggcaaacacagacacagggagaagggccaaggaagaggtggaacgtcctatgaccac
agctctccaaatacctcaatcccacctgctggcccgcctgccgcccgtccttgccaaccc
tcaccgtcaccacatccatccaaacacaaaaagtcagagaggggagggaccctgaacaag
tcaaacccagctcaacccaaaccccccgtcaagggctcaccactgctagcctgtccccca
cccaccaccaccaataacaacaacatcagcaagaccagtaagaccagtcaccagcccacc
agccctccaaaaccttctaaatgcagcacagagaggaaggctgattctaccacctccacg
ctctcatccaaaaccgcagcagctcccactgtggctgggtcaggggggtccatcccaagc
cagcagagccagactgagacaaggggtgtatgtccagaagggggggtcctgcgggcccca
gatctccagcctgcggcaggggtgggcagtgtggaggagctgggagacaacccccccgcc
agcccccctgtgctcagctggcaaggctccccggcatcagccctgagtgaggaagaagag
gaggaagagcagggaggagtgatgaggagacctgtcctgcagcccagccccacccacagc
ccgtccctctcacccccccatgggaactcagagggactcaatgagaaggcggagggcgtc
agtgaggggaggggtgctgatgagcttcgccatagcgacctggccaagctctatggcctg
cctgatactcccaatggagtggaggaagaggaggatgaggaagaggaggacagtagtggg
gacacgtcgtccagctctcttcttccgcgtcggccacacctccaccagacaggagtggct
gatgtcttcaagtctttggcatcgttcctagggggccagaggtacacatatcggggcggc
ccgtttgggcgtcctcctcctagctccatgggaggagtgaagtactcctcatccctcgcc
atggatccagaaaccaactgtcaggaccagcagtgtccctccccaacatcagactccacc
acgcccccaagactcactacccaatcatccactcacactacctcagatccgccttccaaa
ccccgccctcccgtagacctcaaccaaccacagctctccgtgggggagcgcactaaacag
aagcatgcgcgattggaggagattcagaatgagagaaagaaggagaggactaaatgtgta
gacagtggggagacagccgggtctctgagcgctgagctgagattgaccaccacacaccgg
ctccctgccaccaccaaggaggagcgggggcagagggaggtacgcaggcagacaggcagg
aagaggctacaaagcggtgcagatggaaacagggaaggagaagggaagaggaagagaaga
aaacaatataacagcgtcagtaatcatcagagtggaggcaatgaaaagaaaaagatggaa
gaaaagagtgaaagaaaatcagcctcctccattacgttgtcctcatctacacctcacccc
agtagcccggtcaagctgttcaaagacactaagaagagccgtcagattcaggggaatctt
ggcctccagagcaaagacatccagggacagaaagacaaggcacacacaggaaacactgag
cagggggcacaatcaacagagaggaaggaggagaggggcagtgagcctgaaaccattacg
tccacaccaggcagcaacacagacacagtggcaacagcaacttccaccagcaccttcaac
acctcctccactgttaccacctcccctacccccaccccggccccctctgctgccccagtg
aggaggaacccctgtcccctggctgctgctgacttcctgaagctgaaggccctgtccatg
ggccctcccaaggaactgaagatccgtctgatcaaggtggagagtggagacagagagacg
ttcatcgcctccgaggaatgcaggatccccctaggagaggtcagcatcagacacacagcc
agcgaggtcatcagggcctgcaagggggcaaaggtgaaggggaagtttcgggagtcctat
ctgctccctgctttctctgtcaagcctgttctcagcaccaacccacccatcccgcgagag
aagctcaatccccccacaccaagcatctatttggagagtaagagagatgccttctcccca
gtcctcctccagttctgtactgatcccaagaaccctgtcactgtcatcagaggcctggct
ggatccctcaggctcaacctgggtttgttctccactaagtctctggtggaggccaatgcg
gagcatgctgtggaggtgaggacccaggtgcagcagcctgctgatgagaactgggacgcc
actggttcagcccagacctggccctgcgagagcagccgctcacacaccaccatcgccaag
tacgcccagtaccaggcctccagcttccaggagagcctccaggaagagaaggacagtgag
gatgaggatgaggaagaagagaatgagacttcatcctctgacccatcaaccacccctgca
tctggcaccagcaaaaccagccctactacggtcgccagcaaagccaaccctactgtggtt
gctagcaaagtcggccctacccctattgctaacacactcaggccagaggcaaaatcaact
ggaaagatcatcaaattcggcaccaacatcgacctctctgatcctaagaggtggaagccc
cagctgcaggagctgctaaagttgccagccttcatgcgtgtggagttcaatgggaacatg
ctgagccacgtaggacacaccatcctgggcatgaacaccgtccagctctacatgaaggtc
cccggcagtcgcacgcctggccaccaggagaataataacttctgctctgtgaacatcaac
attgggccgggggattgtgagtggtttgcagtccatgaacactactgggagcacatcaac
aacttctgtgagaagcatggagtagactacctgacggggtcctggtggcctgttctggag
gatctttaccgctccaacatcccagtgtaccgcttcatccagagaccaggggacctggtg
tggatcaacgcagggtccatccactgggtgcaggctgtgggctggtgcaacaacatagcc
tggaacgttggacctctcaactcataccagtatcagttggctctggagcgctttgagtgg
aacgaggtgaagaaggtcaagtccatcgttcccatgatccatgtctcctggaacgtagcc
cgcactatcaagatcacagaccaagaaacctacaagatggtcaagcattgtctcctgcag
tccattaagcacatccagattcagagagaccggctggttgctgcagggaagaagatctct
tatcagagccgtgtgaaggacgaaccagcctactactgcaatgagtgtgacgtggaggtg
tttgatctgctgtttgtgaccagtgagtctggcaataggaagacctatatggtgcactgt
gaggactgtgccgggaatgtctccaagagcccctcactggcaggagttgtggtgctggag
cagtaccgcatggaggagctgatgagaacctacgacagcctctgtgtgactccatcaccc
tgttccaagtga

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