Coregonus clupeaformis (lake whitefish): 121582488
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Entry
121582488 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM32-like
KO
K10607
tripartite motif-containing protein 32 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121582488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121582488
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121582488
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121582488
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_4
Baculo_IE-1
zf-RING_4
Prok-RING_4
zf-RING_11
HIP1_clath_bdg
FBF1
Haem_bd
Motif
Other DBs
NCBI-GeneID:
121582488
NCBI-ProteinID:
XP_041754241
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Position
15:complement(35191490..35198828)
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AA seq
680 aa
AA seq
DB search
MAAASPALDPDLLREVLECPICLETYNQEQLRPKLLQCGHTVCRQCLEKLLASTINGVRC
PFCSRVSRMSSISQLADNLTVLKILDCVSSCTTAGALMCKSCRNRLPRQYCLDCGTVLCD
LCKGEGHQQQGHAVQPIRVAAEHHRKDLGGKLASLRKAMDHIQQKKATVDSVTKNMRVKY
RAVQQEYARAELRLQEELGHQRQAFAASMAEVEKLNGQILEEQTYLLNLAEVKVVSRCDY
LTMRVKQSDIALLEEDGGGNDEELDLRSSLDLPTLLKLQDPELVTTEHPEALDVAQLTTK
PCTVNTDEEGLLEFRAGAGVGAMCGAAGAPLELFRDIDMVMSVEEAVCASPGSFKSKSMD
EGGSSSPGGAGARASSGPQHCQFVKKMGCKGNLPGMFNLPVSICVTPQGEVLVADRGNYR
IQIFNRKGFQREIRRNPSSIDNFVLSFLGADLPNLIPLSIAITPQGLIGVTDNYDNSVKV
YTIDGHCVACHKNQLIKPWGIAAMPTGQFVVSDVEGGKLWCLAVDRNVGVVNYNRLCSAV
RPKFVTCDASGTVYFTQGLGLNIENRHNEHHLEGGFSICSVGTDGQLGKQLSHFFSETED
FRCITGMCVDTNGDLLVTDSGRKEILQFPKEGGFNVLIQEGLTCPVGVAVTEKGQLMVLD
CWDHCVKVYSYLQRRRFSTC
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcttcgccagctctggacccggacctgctccgggaggtcctggagtgcccc
atctgcctggagacttacaaccaggagcagctgcggcccaagctcctgcaatgtggccac
accgtgtgcagacagtgtctggagaagctgctggctagtaccatcaatggtgtgcgctgt
cccttctgcagcagggtctcccgcatgagcagcatctcccagctggccgacaacctcact
gtgctcaagatcctggactgcgtcagctcctgcacgaccgccggcgccctaatgtgcaag
tcctgccgcaaccgcctaccccgacagtactgccttgactgcggcactgtgctctgtgat
ctctgcaagggtgagggccaccagcagcagggtcacgccgtccagcccatccgggtggcc
gctgagcaccaccggaaggacctgggcggtaaactggcgtccctccgcaaagccatggac
cacatccagcagaaaaaggcgacggttgacagtgtgacaaagaacatgcgggtgaagtac
cgggctgtgcagcaggagtacgcccgggctgagctgcgtctgcaggaggagctggggcac
cagcggcaggccttcgctgcctctatggctgaggtggagaagctgaacgggcagatcctg
gaggagcagacatacctgctgaacctggccgaggtgaaggtggtgtcccgatgcgactac
ctcaccatgcgggtgaagcagagcgacatcgccctgctggaggaggacggagggggaaac
gatgaggagctggacctgaggagcagcctggacttacctacgctgctcaagcttcaggac
cctgagctggtgacgacagagcaccccgaggccctggatgtggcccagctcacaaccaag
ccctgcactgtcaacactgatgaggaggggctgctggagtttagagccggggctggcgtt
ggtgccatgtgcggggctgcaggggccccactggaactgtttagagacattgatatggta
atgtctgtagaagaggctgtgtgtgcatcaccgggcagctttaagtccaagtccatggat
gaaggggggtcctcctcgcccggtggtgcaggggccagggccagctcggggccacagcac
tgccagtttgtaaagaagatgggctgcaagggcaacctgccggggatgttcaacctaccg
gttagtatctgcgtcaccccgcagggcgaggtcctggtggccgaccggggcaactaccgc
atccagatcttcaaccgcaagggcttccagagggagatccgccgcaaccccagcagtatc
gacaactttgtcctgagcttcctgggcgccgacctgcccaacctcatcccgctgtccatc
gccatcactcctcagggccttatcggggtcactgacaactacgacaactcggtcaaggtg
tacaccatcgacggccactgcgtggcctgccacaagaaccagctaatcaaaccctggggc
attgccgccatgcccacgggtcagtttgtggtgtcggatgtggagggcggcaagctctgg
tgcctggccgtggaccgcaatgtgggcgtagtcaactacaaccgcctgtgctcggccgtg
cggcccaagttcgtgacgtgcgacgcatcgggcaccgtctacttcacccaagggttgggc
cttaacattgagaaccgtcataacgagcaccacctggaggggggcttctccatctgctca
gtggggacagacggccagctgggcaagcaactcagccacttcttctcggagacggaggac
ttccgttgcatcacgggcatgtgcgtggataccaacggggacctgctcgtgacagacagc
ggcaggaaggagatcctgcagttccccaaagagggcggctttaacgtgctcatccaggag
ggactgacgtgccctgtgggcgtggccgtcactgagaaaggacagctgatggtgctggac
tgctgggaccactgtgtgaaagtttactcgtacctacagaggagacgcttctccacctgc
tag
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