Coregonus clupeaformis (lake whitefish): 121583000
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Entry
121583000 CDS
T08357
Symbol
tp53bp1
Name
(RefSeq) TP53-binding protein 1 isoform X1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121583000 (tp53bp1)
BRITE hierarchy
Motif
Pfam:
53-BP1_Tudor
BRCT_3
BRCT_2
Tudor_5
DUF4537
RTT107_BRCT_5
XAP5
Motif
Other DBs
NCBI-GeneID:
121583000
NCBI-ProteinID:
XP_045065528
LinkDB
All DBs
Position
30:complement(44441953..44478994)
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AA seq
1932 aa
AA seq
DB search
MDPGGSDLDSSLPHPENPCLIVEDSQPDSAALEDDPDSSYRALLARRLSSLQPATSHSPV
LELISSPAGNRYSETDSQSERIQNNNHNGPVNQEESQVLEVCSLPNTRRCATGGMAMESG
ADSTTQCAQSEGGVSQFGFLELSESQGLGEVVGNSQEEEGPTAAQTDSQRHNKPGNNTTG
EQKNMTTGLPSGSQDSKSKRSEVSSSSSSESLGRAGRELSVQALLHSQGLQASEDQDPKG
DDSELLSSQEDLFDADRTGTRVDSTVSEPENQAVPTLTPANTLRLLHLSGQGTLVQESLS
QNSVDFVAPTQENLSQTPFIVPSSPTGQENEMGADEPMDTSMPPEDQSDGKEEEPMDMDP
APKSRPSASTPVFQNSPDFVLERTLSLPTQPEFSHDVFVPTQSQEAGSSSTAPQEMNSRK
VTSSSQPTSLESSSSKMAAAAAQPKAPTTTDRERSVTDSFQLELSVNTQSCSLAQQASMQ
AGGKDVEEDSQATQIEEGLDGPLRKDTSDSVMSRNSQKRESNGVPSDPKTSAILPKVPQV
PDLLKTSGESARREECNTSQKSDTHKQTTLNVRSVNVGHDGINVTKTDSSQKQNAKASSP
SPSSQQKLETIDLLTPSSCVQETPSSSNSTPCSLASLSQSQAQSVFSQMSRVGSVKALSP
SPGVSVDSRRDGGGRREVGEAGGGGVGSPISSQKNQDPAKSRQSLSQERGGTATNSPKEK
NIADEEEMEEEGEKQQDSTLGPEGSGLYLSLSQSQVLSPEPMEEGGEEEEKQGRFPVSHS
RSEGGGEEESCGSVIVLEESERSSQLLEKEVTSPSKMGTSQPVASRRGSVSSNGTGSQLK
DTQRVPIGLSQTEKGGSREAEGLRDKSLSDSSGEIPFHFTLPKEGELIGPPVSATPPLIS
QLKQTPRHSTPIEMTFFSEKSAAAGDVSTETAMATSEIMAGESGEDTAEGDDGKLSLRMK
LVTPVEEGSSERFSLQKPPLSDEEGSVSKVTTVVKAVTSPLPSPSVFSRVREAHRQVMED
QAEAHPSGPGTPVRGELFSSPSQQTSSQRPTISSPSLGCISLPNSQSEPPSSPRQEVKCM
LSLGLREKAPPAEPSTPGRPAVPTPQTGTAAGERESCGPPEPSTPTRAAAIRQRAVSQQT
SFDNTISPSSPSKLCQRVASQQTSFDAAGPRSPTASGEPETPPSRAAAGPTHRRHVRTIQ
EVRTTVTRIITDVYYEDGREVDRKVTEESEEPVVDSRVLDSDISPCRTGSSMTSGDLGDV
SSLSSKASSLQHSSGGTSTVRGPAQRGPDFIMPPSRGAKSASPRRGSGPQQRGHRGQVAG
SEFMGERVQGLHGSRAFTPLTPRGRARRGRPPSRSPLSRGAGVPRANARGQPLSSSEDEP
YTRLCPTPRIPDSPAVPSHSSTSLLTTTSPDEGSPAGSSFVGLRVVAKWSSNGYFYSGRI
TKDLGEGRFRLLFDDSYECEVTGKDILLCDPIPLDTEVTALLEDEYFSTGLVKGYKTEGK
ELFYSVEKQGQTTATTAGEREGQTTATTAGEREGQTTATTAGEREGQTTATTVVERQWYN
RSSVILTMEQGNRLREQYGLGPYEPSTPLTKASDISLDNLVEGKRRRRGITGGAQGTPNR
SSDSPRTPGPSGKRKLISSEDRDRERTPAKRGRRGGGGPRAGQRVGVCNTSGSGTDLPCD
HGALLETHGPLPQSASLFLGFAFMLTASSESDRQTNQPISDGEEEYVQTAPYHKRYTETQ
LEAGGGFILQDFNEEQCKAAYQSLLITDQHSRTRKYLLCVASGVPCVSHIWVRDSCKEGK
LLNYRNYLLPAGVGPDDRIVEWHPRCSPFKALRVLLVFEKPVELWSELLTMSGASSVRQH
QADKDSSDIPGGKFDVVVTDRTCPPLVLKSVTSQEVPMVSPEWLIHSLICGERLGYHSNP
QYHHDYTSPPSS
NT seq
5799 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggcggaagtgacctggattcgagtctgccccatcccgagaacccgtgcctg
atcgtggaggactcccagcccgatagtgcagcactggaggacgacccggacagcagctac
cgcgccctgctcgcccgccgcttgtccagcctgcagcccgccacctcccacagccctgta
ctggagctgatctcctctccggcaggaaacagatactccgagacagacagccaatcagag
aggatccagaacaacaatcacaacgggccagtcaaccaggaggaaagtcaagtcctagaa
gtttgttcgctccccaatacaaggaggtgtgctacaggaggcatggccatggagtctggg
gcggactccactacacaatgcgcccagtctgaaggaggagtgtcccagtttggttttctg
gagctttctgagagccagggtctgggtgaagtggtggggaacagtcaggaggaggagggg
cctactgctgcccagacagacagccagagacacaacaagccaggtaacaatactaccggt
gaacagaagaatatgacaacgggcttaccttcaggcagtcaggacagcaaatccaagagg
tcggaggtgagctctagcagctcgtcggagtccctgggtcgggccggccgggaactgagt
gtccaggctttgctccactcccagggcctgcaggcctcagaggaccaggatcccaaaggg
gacgactctgagctgctgtcctctcaggaggacctcttcgacgctgacaggacaggcaca
agggtggacagcacagtgtcagagccagagaaccaagccgtgcccacccttacccccgcc
aacaccctgcgtctgctgcacctctctgggcagggcactctggtgcaggagagcctatcc
cagaactctgttgactttgtagcacccacccaggaaaatttgagccaaacaccttttatc
gtccccagttcaccgacaggacaagaaaatgaaatgggtgccgatgaaccaatggacacg
tctatgcctccggaggaccaatcggatggcaaggaggaggagccaatggacatggaccca
gctcctaagtcacgcccctcggcgtccaccccagtattccagaactccccagattttgtg
ttggagaggaccctctctctgcctacccagcctgagttctctcatgatgtatttgtccca
acccagagccaagaggctggaagcagtagcacagctccacaagagatgaacagcaggaaa
gtgacgtcatcatcccaacccacatcactggagtcaagctcatccaagatggccgccgca
gccgcccagcccaaagcacctacaacaactgaccgtgaacgctctgtgacggattctttc
caactggagctgtctgtgaatactcagagctgtagtctggcccagcaggcttcaatgcag
gctggggggaaggatgtcgaggaggacagccaggctacacagatagaagaaggtctggac
ggacccctacggaaagacaccagtgactctgtaatgtcacgtaacagccagaagagggaa
agtaacggggtcccctccgacccaaaaacctctgctattttgcctaaagttcctcaggtg
cctgacttgctgaagactagcggggaaagtgccaggagagaggaatgtaacacatcacag
aagtctgacacgcacaaacagacaaccttgaatgtacgcagtgtgaatgtaggtcacgat
ggtatcaatgtgaccaaaacagatagttctcagaagcagaatgccaaggcctcttccccc
tctccctcctcccaacagaagcttgaaaccatagacttgttaacccctagcagctgtgtg
caggagacgccttcttcctccaatagcactccctgtagtttggcctccctgtctcagtct
caagcccagtctgttttctcacagatgtctcgcgtgggctcagtgaaggctctctcgccg
agtccaggtgtttctgtagactctagaagagatggaggaggaaggagagaagtaggagaa
gccggaggagggggagtgggaagcccgataagctcacagaaaaaccaggacccggctaaa
tccagacagtctttgtcacaggagcgtggaggcactgctaccaacagccccaaggagaaa
aacatagcagatgaagaagagatggaggaggagggagagaagcagcaggacagcacattg
gggcccgagggctcaggcctctatctgtctctctctcagagccaggtgctttctccagag
cccatggaggaaggaggagaggaggaagaaaaacaagggaggttccctgtctcgcactcc
aggagcgagggaggaggagaggaggagagctgcggcagtgtcattgtgctggaggagagc
gagaggagctcccagctcctggagaaggaagtgacgtcgccgtcgaagatgggcacgtct
cagccagtggcaagccggcgggggtcggtgtcgtcaaatggcacggggtcacagctgaag
gacacccagcgggtaccaatcggactctcccagactgaaaagggagggtctagggaagca
gaggggctccgtgacaagagcctcagtgacagctctggagagatcccattccacttcact
ctccccaaagaaggcgagctgattggccctcctgtgagtgccactccccctctgatcagc
cagttgaagcagacaccgagacacagcactccgattgagatgactttcttctctgagaag
tctgcggcggcgggtgatgtttccacggagacagcgatggcgaccagcgaaatcatggcg
ggggagagtggcgaggacacggccgaaggggatgatgggaaactgagtttgcggatgaag
ctggtgacgcctgtggaggagggcagctcagagcgcttcagcttgcagaagccaccgcta
tcagacgaggaaggctctgtctccaaggttaccaccgttgtcaaggctgtaaccagcccc
ctccccagcccctctgtgttcagcagggtgagggaggcccacagacaggtgatggaggac
caggccgaggcccatcccagtggccctggaacccctgtcagaggggaactgttcagctca
ccctcacagcagacaagctcccaaagacccaccatctcctctccttcccttggatgcatc
agcctccccaacagccaatcggagcctccctccagcccccgccaggaagtgaagtgtatg
ttgtcattggggctcagagagaaagcgcctccagctgaaccatccaccccaggccgtcca
gcagtgcctaccccacagacaggcaccgcagctggggagagagagtcgtgtgggcccccg
gagccatccacccccaccagagccgctgccatcagacagagggctgtgtcccagcagaca
agctttgacaacaccatctctcccagttcacccagtaagctctgtcagagagtggcgtct
cagcagaccagttttgatgcggctggccccaggtctccaacagccagcggcgagccagag
accccgccctcgagggcagccgccggccccacccatcgcagacacgtgcggaccattcag
gaagtgcggacgacggtcacacgcatcatcacagatgtgtactacgaggatgggagagag
gtggaccgtaaggtcactgaggagtcggaggagccggtggtggacagccgtgtgttggac
agcgacatctctccgtgtcgcaccggcagctccatgacctccggtgacctgggtgatgtc
agctctctgtcctccaaggcttccagcctgcagcacagctccgggggcaccagcacagtc
aggggccctgcccagaggggccccgactttatcatgccgcccagccgaggggccaagtct
gccagccccaggaggggtagtgggccgcagcagaggggccacaggggtcaagtggcgggg
tcagagttcatgggagagagagttcaaggacttcatgggtcgcgggccttcaccccactg
acgccccgcggaagagccaggaggggcaggcctccgtcccgctcacctctgtccaggggt
gcgggcgtcccgcgtgccaatgcccgcggccaacccctgtcctcctccgaggatgagccc
tacacccgcctgtgtcccaccccgcgcatcccagacagccctgcggtccccagccactcc
tccacgtctctcctcaccaccacctccccagatgaaggcagtccagctgggagcagcttc
gtggggcttcgcgtggtggccaagtggtccagcaacggctacttctactcgggccgcatc
accaaggacctgggcgaggggcgtttccggctgctcttcgatgacagctatgagtgcgag
gtcacgggcaaggacatcctgctgtgtgaccccatccccctggacactgaggtcacggca
ctgctggaggacgagtacttcagcacaggtctagtgaagggctacaagacggagggcaag
gagctgttctacagtgtggagaagcagggccagactacagccactacagctggagagagg
gagggccagactacagccactacagctggagagagggagggccagactacagccactaca
gctggagagagggagggccagactacagccactacagttgtagagaggcagtggtacaac
cgcagttccgtcatcctgaccatggagcaaggcaacaggctgagagaacagtacggcctg
gggccctacgagccatccacgcccctgaccaaggcctccgacatcagcctggataacctg
gtggaggggaagaggagacgcagggggatcacagggggggcccaggggacccccaaccgc
agctcagacagcccccgcacccccggcccctctgggaagaggaagctgatcagctctgag
gacagggacagggagaggaccccggctaagcgaggccgcagggggggaggaggacccaga
gccggtcagcgggttggtgtgtgtaacacctcaggcagtggcactgacctgccctgcgac
catggtgccctgctggagacccacggcccgctgccccagagtgcatctctcttcctgggc
tttgccttcatgctgacggcatcgtcagagagcgaccgccagaccaaccagccaatcagc
gacggcgaggaggagtacgtgcagacggccccctatcacaaacgctacactgagacccag
ctggaggccggaggaggcttcatcctccaggacttcaacgaggaacagtgcaaggcggcc
tatcagagcctgctgatcaccgaccagcatagccgaaccaggaagtacctgctgtgtgtg
gccagtggtgtgccgtgtgtgtctcacatctgggtgagggacagttgcaaggagggcaag
ctgctcaactacaggaactacctgctgcccgccggagtgggccccgacgaccgcatagtg
gaatggcatccgcgctgcagcccgttcaaggccctgcgggtcctgttggtatttgagaag
ccggtggagctgtggtctgagctgctgacgatgagtggagcttcctctgtgagacagcac
caagcagacaaggacagctctgacattcctgggggcaagtttgacgtggtggtcacagac
cgcacctgtccgccattggttctgaagagtgtgacatcacaggaagtacccatggtgtcg
ccagagtggctaatccacagtctgatctgtggggagcgcctgggataccatagcaacccc
caatatcatcatgactacacatccccaccctcatcctaa
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