Coregonus clupeaformis (lake whitefish): 121586640
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Entry
121586640 CDS
T08357
Symbol
itgb8
Name
(RefSeq) integrin beta-8
KO
K06591
integrin beta 8
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510
Focal adhesion
cclu04512
ECM-receptor interaction
cclu04514
Cell adhesion molecules
cclu04810
Regulation of actin cytoskeleton
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121586640 (itgb8)
04514 Cell adhesion molecules
121586640 (itgb8)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121586640 (itgb8)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121586640 (itgb8)
04810 Regulation of actin cytoskeleton
121586640 (itgb8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121586640 (itgb8)
04515 Cell adhesion molecules [BR:
cclu04515
]
121586640 (itgb8)
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121586640 (itgb8)
Cell adhesion molecules [BR:
cclu04515
]
Integrins
Integrin beta subunits
121586640 (itgb8)
BRITE hierarchy
Motif
Pfam:
Integrin_beta
PSI_integrin
EGF_2
EGF_Tenascin
Motif
Other DBs
NCBI-GeneID:
121586640
NCBI-ProteinID:
XP_041759461
LinkDB
All DBs
Position
17:complement(48898723..48915848)
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AA seq
822 aa
AA seq
DB search
MTSWLHKYGNPTLHRVLLCVVLAANIIGGNTHSGESVCSSPPVSSCSECLRRGPQCAWCF
EEGFLDGAEMGERCDLAGTLARRGCDLEFIEHPEVMVEVNATTSSTQVSPGAITITLRPG
AEASVIVAVQQLERYPVDLYYLVDVSASMQENLDQLKTVGVALSHRMREHSSDLRLGFGS
FVDKPVSPYINVHPSKINNPCSDFEVKCRPAHGFHHVLSMTANMSEFTRVIKRQRISGNM
DTPEGGLDAMLQATVCQGEVGWRGEAKRLLLLMTDQPSHLALDSRLAGIVTPHDGHCHLE
NNIYMESTTMDHPSLGLLAEKLLENHIYSLFAVEQLQYQWYEELVRLLPGSNLLFQAPNL
IDVVVDAYKRLLSVVQVSVSVEDRAFSRFLVSVSPLCPEGSVSHDNRSCSNVQPNQTVYF
NITIGLHSCPDDHDDEDDVVQVFVRPVGYNESAIIKVHSRCRCHCGPDWRCHDDTTHQST
CGEDTPDTDHNNQDLNNPDMHTRTPDLDPEHTPTHPHTHGPAWSWQCREGGSGVDCNGRG
VCVCGKCVCERNSLGTVYGQYCQMDDYSCPYQHGLLCGGRGMCVSGECVCEEDWTGESCM
CPVSTATCLSDNGVLCSGRGRCVCGRCVCDDHQYSGAFCERCPTCHSSCQSHWRCIDCHL
SYGLSQREAGQCNHTCAPLVGYVNDVTVLVGQEWRQCVYKKDNCNYRFHTALVSGNTLLH
FNTQPECVSSRRYVGTFLSVCVLTFLPGLVMLAVLVLLLQRRSLPQSGATDQQYNPTGKD
LSHIPATNEKTVSYRRDRPPSPDRPMEMHITVPKMPLGEPWQ
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgacttcctggctacataaatacggtaacccgactctgcatcgcgtgctgctctgcgtg
gtattggccgctaacatcatcggcgggaacactcattccggtgagagtgtgtgttcgtct
cctcctgtctcgtcgtgttcagagtgcctccgacgcggaccacagtgtgcctggtgcttt
gaggagggtttcctggatggagcagagatgggagagcgctgcgacttggcggggaccctg
gcaaggagggggtgtgacctagagttcatagagcatccagaggtcatggtggaggtcaac
gctacgaccagcagcactcaggtgtcacctggagcgatcaccatcacactcagaccaggt
gctgaggccagtgtgatagtagcagtacagcagttagagaggtatcctgttgatctgtac
tacctggtggacgtatcagcatccatgcaggaaaacctggaccagctgaagacggtgggc
gtggccttgtcccaccgtatgagagaacattccagtgatctgcgtctggggttcggctcc
ttcgttgacaaacctgtctccccctacatcaacgtacacccctctaagataaataacccc
tgcagtgactttgaggtgaagtgtcgaccagcccatggcttccaccatgttcttagtatg
acggcaaacatgtctgagtttacacgcgtcatcaagagacagaggatatcaggcaacatg
gacacaccagagggagggttagatgctatgctgcaagctactgtatgccagggtgaggtg
ggttggcgtggggaggccaagcgtctgttgttgttgatgacagaccagccttctcacctg
gcgttggacagtagactggctggcatagtcacaccccacgacggccactgtcatctggag
aacaacatctatatggagagtactaccatggaccatcccagtttaggcctgctggccgag
aagcttctagagaaccacatctactctctctttgctgtggaacaactacaatatcagtgg
tatgaggagttggtcaggttgctaccaggctctaatcttctgttccaggctcccaacctt
atagacgtggtggtggacgcatacaagaggttgttgtcagttgtccaggtgtccgtgtca
gtggaggacagagcgttcagtcgtttcctggtcagtgtctctcctctctgtccggaagga
tctgtatcccacgacaaccgcagctgctccaacgtccagcccaaccagacggtctacttc
aacatcaccatcggcctgcactcctgtcctgacgatcatgatgatgaagatgacgtggtc
caggtcttcgtcaggcccgtgggttacaatgagtcagccatcatcaaggttcactcacga
tgtcgctgtcactgtggaccggactggcgttgccacgacgataccacacatcagtcaacg
tgtggagaggacaccccagatacagaccataataatcaagacttgaacaatccggacatg
cacacacgcacaccggacctagacccagagcacacacccacacaccctcacacacacgga
ccggcgtggtcgtggcagtgtcgtgaggggggatcgggggtggactgtaacggtcgggga
gtgtgtgtgtgtgggaagtgtgtgtgtgagaggaacagtctgggaacagtctatggacag
tactgtcagatggacgactactcctgcccctaccaacacggactactgtgtggagggcga
ggtatgtgtgtgtctggtgagtgtgtgtgtgaggaggactggacaggggagagctgcatg
tgcccagtctccacagcaacctgcctgtccgacaacggggtgctatgcagcgggcgtggc
aggtgtgtgtgtggcaggtgtgtgtgtgacgaccatcaatattccggagcgttttgtgag
agatgtcccacctgccacagctcctgtcagtcacactggaggtgtatagactgtcacttg
tcttacggtctgtctcagagagaggcggggcagtgcaaccatacctgcgccccattagtg
ggttacgtcaatgatgtcacagtcctagtaggtcaggaatggagacagtgtgtgtataag
aaagacaactgtaactatcgcttccacactgcacttgtctcaggaaatactcttctacat
ttcaacacacaacctgagtgtgtatccagtaggcggtatgtggggaccttcctcagtgtg
tgtgtgttgacgttcctccctggcttggtgatgctggctgtactggtgctgctgctgcag
agacgatctttgccacagagtggcgccactgaccaacaatacaaccccactggcaaggat
ctgtcacacatcccagcgaccaatgagaagacggtatcctaccggagggaccgccccccg
agccctgaccgtccgatggagatgcatatcaccgttcccaagatgcccctgggcgaaccc
tggcagtga
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