KEGG   Coregonus clupeaformis (lake whitefish): 121586640
Entry
121586640         CDS       T08357                                 
Symbol
itgb8
Name
(RefSeq) integrin beta-8
  KO
K06591  integrin beta 8
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510  Focal adhesion
cclu04512  ECM-receptor interaction
cclu04514  Cell adhesion molecules
cclu04810  Regulation of actin cytoskeleton
cclu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121586640 (itgb8)
   04514 Cell adhesion molecules
    121586640 (itgb8)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121586640 (itgb8)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121586640 (itgb8)
   04810 Regulation of actin cytoskeleton
    121586640 (itgb8)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cclu04147]
    121586640 (itgb8)
   04515 Cell adhesion molecules [BR:cclu04515]
    121586640 (itgb8)
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   121586640 (itgb8)
Cell adhesion molecules [BR:cclu04515]
 Integrins
  Integrin beta subunits
   121586640 (itgb8)
Motif
Pfam: Integrin_beta PSI_integrin EGF_2 EGF_Tenascin
Other DBs
NCBI-GeneID: 121586640
NCBI-ProteinID: XP_041759461
LinkDB
Position
17:complement(48898723..48915848)
AA seq 822 aa
MTSWLHKYGNPTLHRVLLCVVLAANIIGGNTHSGESVCSSPPVSSCSECLRRGPQCAWCF
EEGFLDGAEMGERCDLAGTLARRGCDLEFIEHPEVMVEVNATTSSTQVSPGAITITLRPG
AEASVIVAVQQLERYPVDLYYLVDVSASMQENLDQLKTVGVALSHRMREHSSDLRLGFGS
FVDKPVSPYINVHPSKINNPCSDFEVKCRPAHGFHHVLSMTANMSEFTRVIKRQRISGNM
DTPEGGLDAMLQATVCQGEVGWRGEAKRLLLLMTDQPSHLALDSRLAGIVTPHDGHCHLE
NNIYMESTTMDHPSLGLLAEKLLENHIYSLFAVEQLQYQWYEELVRLLPGSNLLFQAPNL
IDVVVDAYKRLLSVVQVSVSVEDRAFSRFLVSVSPLCPEGSVSHDNRSCSNVQPNQTVYF
NITIGLHSCPDDHDDEDDVVQVFVRPVGYNESAIIKVHSRCRCHCGPDWRCHDDTTHQST
CGEDTPDTDHNNQDLNNPDMHTRTPDLDPEHTPTHPHTHGPAWSWQCREGGSGVDCNGRG
VCVCGKCVCERNSLGTVYGQYCQMDDYSCPYQHGLLCGGRGMCVSGECVCEEDWTGESCM
CPVSTATCLSDNGVLCSGRGRCVCGRCVCDDHQYSGAFCERCPTCHSSCQSHWRCIDCHL
SYGLSQREAGQCNHTCAPLVGYVNDVTVLVGQEWRQCVYKKDNCNYRFHTALVSGNTLLH
FNTQPECVSSRRYVGTFLSVCVLTFLPGLVMLAVLVLLLQRRSLPQSGATDQQYNPTGKD
LSHIPATNEKTVSYRRDRPPSPDRPMEMHITVPKMPLGEPWQ
NT seq 2469 nt   +upstreamnt  +downstreamnt
atgacttcctggctacataaatacggtaacccgactctgcatcgcgtgctgctctgcgtg
gtattggccgctaacatcatcggcgggaacactcattccggtgagagtgtgtgttcgtct
cctcctgtctcgtcgtgttcagagtgcctccgacgcggaccacagtgtgcctggtgcttt
gaggagggtttcctggatggagcagagatgggagagcgctgcgacttggcggggaccctg
gcaaggagggggtgtgacctagagttcatagagcatccagaggtcatggtggaggtcaac
gctacgaccagcagcactcaggtgtcacctggagcgatcaccatcacactcagaccaggt
gctgaggccagtgtgatagtagcagtacagcagttagagaggtatcctgttgatctgtac
tacctggtggacgtatcagcatccatgcaggaaaacctggaccagctgaagacggtgggc
gtggccttgtcccaccgtatgagagaacattccagtgatctgcgtctggggttcggctcc
ttcgttgacaaacctgtctccccctacatcaacgtacacccctctaagataaataacccc
tgcagtgactttgaggtgaagtgtcgaccagcccatggcttccaccatgttcttagtatg
acggcaaacatgtctgagtttacacgcgtcatcaagagacagaggatatcaggcaacatg
gacacaccagagggagggttagatgctatgctgcaagctactgtatgccagggtgaggtg
ggttggcgtggggaggccaagcgtctgttgttgttgatgacagaccagccttctcacctg
gcgttggacagtagactggctggcatagtcacaccccacgacggccactgtcatctggag
aacaacatctatatggagagtactaccatggaccatcccagtttaggcctgctggccgag
aagcttctagagaaccacatctactctctctttgctgtggaacaactacaatatcagtgg
tatgaggagttggtcaggttgctaccaggctctaatcttctgttccaggctcccaacctt
atagacgtggtggtggacgcatacaagaggttgttgtcagttgtccaggtgtccgtgtca
gtggaggacagagcgttcagtcgtttcctggtcagtgtctctcctctctgtccggaagga
tctgtatcccacgacaaccgcagctgctccaacgtccagcccaaccagacggtctacttc
aacatcaccatcggcctgcactcctgtcctgacgatcatgatgatgaagatgacgtggtc
caggtcttcgtcaggcccgtgggttacaatgagtcagccatcatcaaggttcactcacga
tgtcgctgtcactgtggaccggactggcgttgccacgacgataccacacatcagtcaacg
tgtggagaggacaccccagatacagaccataataatcaagacttgaacaatccggacatg
cacacacgcacaccggacctagacccagagcacacacccacacaccctcacacacacgga
ccggcgtggtcgtggcagtgtcgtgaggggggatcgggggtggactgtaacggtcgggga
gtgtgtgtgtgtgggaagtgtgtgtgtgagaggaacagtctgggaacagtctatggacag
tactgtcagatggacgactactcctgcccctaccaacacggactactgtgtggagggcga
ggtatgtgtgtgtctggtgagtgtgtgtgtgaggaggactggacaggggagagctgcatg
tgcccagtctccacagcaacctgcctgtccgacaacggggtgctatgcagcgggcgtggc
aggtgtgtgtgtggcaggtgtgtgtgtgacgaccatcaatattccggagcgttttgtgag
agatgtcccacctgccacagctcctgtcagtcacactggaggtgtatagactgtcacttg
tcttacggtctgtctcagagagaggcggggcagtgcaaccatacctgcgccccattagtg
ggttacgtcaatgatgtcacagtcctagtaggtcaggaatggagacagtgtgtgtataag
aaagacaactgtaactatcgcttccacactgcacttgtctcaggaaatactcttctacat
ttcaacacacaacctgagtgtgtatccagtaggcggtatgtggggaccttcctcagtgtg
tgtgtgttgacgttcctccctggcttggtgatgctggctgtactggtgctgctgctgcag
agacgatctttgccacagagtggcgccactgaccaacaatacaaccccactggcaaggat
ctgtcacacatcccagcgaccaatgagaagacggtatcctaccggagggaccgccccccg
agccctgaccgtccgatggagatgcatatcaccgttcccaagatgcccctgggcgaaccc
tggcagtga

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