Coregonus clupeaformis (lake whitefish): 123481296
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Entry
123481296 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP-like isoform X1
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04120
Ubiquitin mediated proteolysis
cclu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123481296
04120 Ubiquitin mediated proteolysis
123481296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cclu03110
]
123481296
04131 Membrane trafficking [BR:
cclu04131
]
123481296
04121 Ubiquitin system [BR:
cclu04121
]
123481296
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123481296
Chaperones and folding catalysts [BR:
cclu03110
]
Other chaperones and cochaperones
Others
123481296
Membrane trafficking [BR:
cclu04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
123481296
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
U-box type E3
123481296
BRITE hierarchy
Motif
Pfam:
U-box
CHIP_TPR_N
TPR_1
TPR_2
TPR_16
TPR_8
ANAPC3
TPR_17
TPR_12
TPR_11
TPR_19
TPR_14
TPR_6
TPR_9
TPR_7
Fis1_TPR_C
NAD_binding_6
Coatomer_E
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
123481296
NCBI-ProteinID:
XP_045061007
LinkDB
All DBs
Position
19:complement(58063824..58073884)
Genome browser
AA seq
288 aa
AA seq
DB search
MAGSPEKSVSAQEWKEQGNRLFLSRKYQESAACYSKAIKRNPSVSVYYTNRALCHVKLQQ
HDKALADCKQALELDPQSVKALFFLGQCHLEMENYDEAIGNLQRAYNLAKEQRLNFGDDI
PSALRIAKKKRWNSIEEKRINQENELHAYLTKLILAEKERELDDSREEQDGKSEECRSRH
DLTKFQSKHDKQLSDMEELFSQLDEKRKKREIPDYLCGKISFELMREPCITPSGITYDRK
DIEEHLQRVGHFDPVTRSPLTQDQLIPNLAMKEVIDAFIMENGWVEDY
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcagccccgagaagagtgtctcggcgcaggaatggaaggagcagggcaaccgc
ctcttcctcagccgcaagtaccaggagtcggccgcctgctacagcaaagccatcaagcgg
aacccctcggtgtctgtgtactacaccaatcgggcactatgccacgtgaagctgcagcaa
cacgataaggccctggccgactgcaagcaggcgctggagctggacccccagtcagtcaag
gccctcttcttcctgggccagtgtcacctggagatggagaactacgacgaagccatcggc
aacctgcagagagcatataacctggcgaaagagcaacggttgaactttggcgacgacatt
cccagtgccctccggatagccaagaagaagcgctggaacagcatcgaggagaagcgcatt
aaccaggagaacgagctgcacgcctatctcaccaaactcatcctggcagagaaggagagg
gaactggatgacagcagagaggaacaagacggcaagtcggaggaatgcagaagccgacac
gacctcactaaattccagtccaaacatgacaagcaactgtcagacatggaggagctcttc
tctcagctggatgagaagaggaagaagagggagatcccagactacctgtgtggaaagatc
agctttgagttgatgagggagccctgcattacacccagtgggatcacttacgaccgcaaa
gacatcgaggagcacctacagcgagtgggccattttgacccggtgacacgcagccctctg
actcaagaccagctgatccctaacctggcaatgaaagaggtcatcgatgctttcatcatg
gagaatggatgggtggaggactactga
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