Coregonus clupeaformis (lake whitefish): 123483220
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Entry
123483220 CDS
T08357
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
123483220
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
123483220
BRITE hierarchy
Motif
Pfam:
PRY
zf-B_box
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
U-box
YscO-like
Fib_alpha
zf-RING_6
ZapD
Y1_Tnp
ETFQO_UQ-bd
Swi5
Motif
Other DBs
NCBI-GeneID:
123483220
NCBI-ProteinID:
XP_045068680
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MAQQGVLLDQDQFCCSVCLDLLKEPVTIPCGHSYCRSCIEGCWDQDVLKGVYSCTQCRQT
FTPRPNLTKSKILAEVVEKLKETGLQAAPPPDLCYAGPGDVACDFCTGTRKQKALMSCLV
CLASYCETHLQPHYEFPAFKKHKLVKATTQLQEKICSDHDKLLEFYCRTDQQCICYLCTM
DEHKGHDTVSAAAERTEKQRQLGMSQQKVQQRFQEREKELNELQQAVESLKSSAQAAVVD
SDKIFTELIRSIERRRSEVKELIRAQEKAQVSQAEGLLEQLEQEIAELRKRSTELEQLSH
TEDHIHLLQSYQSLSNTSVSSDLPSIVVRPLQYFGDVSKTVSELREKLEDVLKGEWTKIS
TTVNIVDVVLPPEPKTREQFLQYSCQLTLDPTTAHTHLSLSKGNRKVTRTDQVQPYPDHP
ERFTYYCQVLCREGLSGRCYWEVEWSGKCVYTAVSYKDISRTETGNRFGYNDKSWSLECY
SGGNCFIHNNVVTKVSGPQSSRVGVDLDHKAATLSFYSVSDTMTLLHRVQTTFTQPLYPG
FRLDGFFSGAAELVKL
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcagggagttctgctggaccaggaccagttctgttgttctgtctgtctggat
ctactgaaggagccggtcaccatcccctgtggacacagttactgtagaagctgtattgag
ggctgctgggatcaggatgttctgaaaggggtctatagctgtactcagtgcagacagacc
ttcactccaaggcctaatctgacgaaaagtaaaatattggctgaggtggtggagaaactg
aaggagacaggactccaggctgctccccctcctgatctgtgctatgctggacctggagat
gtggcgtgtgatttctgcactgggaccagaaagcagaaagcccttatgtcctgtctggtg
tgtctggcctcttactgtgagactcacctccaacctcactatgaatttcctgctttcaag
aagcacaagctggtcaaagccaccacacaactacaggagaagatctgctctgatcatgac
aaactgctggagttttactgtcgtaccgatcagcagtgtatctgttatctgtgtacaatg
gatgaacataaaggccatgatacagtgtcagctgcagcagagaggactgagaaacagagg
cagctggggatgagtcagcagaaggtccagcagagattccaggagagagagaaggagctg
aatgagctccaacaggctgtggagtctctcaagagctctgcacaggcagcagtggtggac
agtgataagatctttactgagctgatccgctccattgagagaaggcgctctgaggtgaag
gagctgatcagagcccaagagaaggctcaagtgagtcaagctgaaggactcctggagcaa
ctggagcaggagatagctgagctgaggaagagaagcactgagctggagcagctctcacac
acagaggatcacatccatctcctccagagttatcagtctctctccaacaccagtgtatct
tcagacttacccagcatcgttgtccgtcctcttcagtactttggagatgtgagtaagact
gtgtctgaactgagagagaaacttgaagacgtccttaaaggagaatggaccaagatctcc
actacagtgaatatagttgatgttgtactgcctccagagcccaagaccagagaacagttc
ttacaatattcctgtcagctcacactggacccaaccacagcacacacacacctctctctg
tctaaagggaacagaaaggtgacacgtacagaccaagtccaaccatatcctgaccatcca
gagagattcacatactactgtcaggttctgtgtagagagggtctgtctggacgctgttac
tgggaggtggagtggagtgggaagtgtgtttatacagcagtctcatataaagacatcagc
agaacagagacaggtaatagatttggatacaatgacaagtcctggagtttagagtgctat
agtggtggtaattgtttcatccacaataatgttgtgactaaagtatcaggccctcagtcc
tccagagtaggagtggacctggatcacaaggcagctactctgtccttctacagtgtctct
gacacaatgaccctcctccacagagtccagaccacattcactcagcccctctatcctggg
tttcgtttagatggttttttctctggtgctgctgagctggttaaactgtag
DBGET
integrated database retrieval system
