Coregonus clupeaformis (lake whitefish): 123483229
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Entry
123483229 CDS
T08357
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
123483229
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
123483229
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
U-box
Fib_alpha
zf-C3HC4_3
zf-RING_2
Y1_Tnp
ZapD
ETFQO_UQ-bd
Motif
Other DBs
NCBI-GeneID:
123483229
NCBI-ProteinID:
XP_045068689
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MAQQGVLLDQDQFCCSVCLDLLKEPVTIPCGQNYCRSCIEGCWDQDVLKGVYSCPQCRQT
FTPRPNLRKNNMLAELVEKLKKTGLQAAPPPALCYAGPGDVACDFCTGIRRQKALMSCLV
CLASYCETHLQPHYEFPAFKKHQLVKATTQLQEKVCSHHDKLLEVYCRTDQQCICLLCVM
DEHKGHDTVSAAAERTEKQRQLGMSQQKVQQREKELKEIQQAVESLKRSAQAAVKDSDKI
FTELIRSIERRRSEVKELIRAQEKAQVSQAEGLLEQLEQDIAELRKRSTELEQLSHTEDH
IHFLQSYQSLYSTSVSSDLPSIVVRPLQYFGDVSKTVSELREKLEDVLKGEWTKISTTVN
IVDVVLPPEPKTREQFLQYSCQLTLDPNTAGTDLSLSKRNRKVKRTDQVQPYPVHPDRFT
NYQVLCREGLSGRCYWEVEWSGDWVVTAVSYKDISSISNRFGLNDKSWSLECYSGGYCFR
HNNVKTKVSGPQSSRVGVYLDHKAGTLSFYSVSDTMTLLHRVQTTFTQPLYPGFRLDRFF
SGTAKLVKL
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcagggagttctgctggaccaggaccagttctgttgttctgtctgtctggat
ctactgaaggagccagtcaccatcccctgtggacaaaattactgtaggagctgtattgag
ggctgctgggatcaggatgttctgaaaggggtctatagctgtccccagtgcagacagacc
ttcactccaaggcctaatctgaggaaaaataacatgttggctgagttggtggagaaactg
aagaagacaggactccaggctgctccccctcctgctctgtgctatgctggacctggagat
gtggcgtgtgatttctgcactgggatcagaaggcagaaagccctcatgtcctgtctggtg
tgtctggcctcttactgtgagactcacctccaacctcactatgaatttcctgctttcaag
aagcaccagctggtcaaagccaccacacaactacaggagaaggtctgctctcatcatgac
aaactgctggaggtttactgtcgtaccgatcaacagtgtatctgtctgctgtgtgtgatg
gatgaacataaaggccatgatacagtgtcagctgcagcagagaggactgagaaacagagg
cagctggggatgagtcagcagaaggtccagcagagagagaaggagctgaaggagatccaa
caggctgtggagtctctcaagcgctctgcacaggcagcagtgaaggacagtgataagatc
tttaccgagctgatccgctccattgagagaaggcgctctgaggtgaaggagctgatcaga
gcccaagagaaggctcaagtgagtcaagctgaaggactcctggagcaactggagcaggat
atagctgagctgaggaagagaagcactgagctggagcagctctcacacacagaggatcac
atccatttcctccagagttatcagtctctctacagtaccagtgtatcttcagacttaccc
agcatcgttgtccgtcctcttcagtactttggagatgtgagtaagactgtgtctgaactg
agagagaaactagaagacgtccttaaaggagaatggaccaagatctccactacagtgaat
atagtggatgttgtactgcctccagagcccaagaccagagaacagttcttacaatattcc
tgtcagctcacactggacccaaacacagcaggcacagacctctctctgtctaaaaggaac
agaaaggtgaaacgtacagaccaagtccaaccatatcctgttcatccagacagattcaca
aactaccaggttctgtgtagagagggtctgtctggacgctgttactgggaggtggagtgg
agtggggattgggttgttacagcagtctcatataaagacatcagcagcatcagtaataga
tttggactcaatgacaagtcctggagtttagagtgttatagtggtggttattgtttcaga
cacaataatgttaagactaaagtatcaggccctcagtcctccagagtaggagtgtacctg
gatcacaaggcaggtactctgtccttctacagtgtctctgacacaatgaccctcctccac
agagtccagaccacattcactcagcccctctatcctgggtttcgtttagatcgttttttc
tctgggactgctaagctggttaaactgtag
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integrated database retrieval system
