KEGG   Coregonus clupeaformis (lake whitefish): 123484166
Entry
123484166         CDS       T08357                                 
Name
(RefSeq) tripartite motif-containing protein 16-like
  KO
K12006  tripartite motif-containing protein 16
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cclu04121]
    123484166
Ubiquitin system [BR:cclu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    123484166
Motif
Pfam: PRY zf-RING_UBOX zf-B_box zf-C3HC4_4 SPRY zf-C3HC4_2 zf-C3HC4 U-box zf-C3HC4_3 zf-RING_6 ZapD zf-RING_2 zf-RING_5 Fib_alpha YscO-like Spc24 Y1_Tnp LMBR1 DASH_Dad3
Other DBs
NCBI-GeneID: 123484166
NCBI-ProteinID: XP_045070110
LinkDB
Position
Unknown
AA seq 552 aa
MAQQGVLLDQDQFCCSVCLDLLKEPVTTACGHSYCRSCIEGCWDQDVLKGVYSCPQCRET
FTPRPNLRKNNMLAELVEKLKKTGLQAAPPPALCYAGPGDVACDFCTGTRKQKALMSCLV
CLASYCETHLQSHYESPALKKHKLVKATAQLQEKICSHHDKLLEVYCRTDQQCICYQCVM
DEHKGHDTVSAAAERTEKQRQLGMSQQKVQQRFQEREKDLKELQQAVESLKRSAQAAVED
SDKIFTELIRSIERRRSEVKELIRAQEKAQVSQAEGLLEQLEQEIAELRKRSTELEQLSH
TEDHIHFLQSYQSLSGTTVSSDLPSIVVRPLQYFGDVSKTVSELREKLEDVLKGEWTKIS
TTVNIVDVVLPPEPKTREQFLQYSCQLTLDPNTAGTHLSLSEGNRKVTYTDQVQPYPVHP
DRFTNWCQVLCREGLSGRCYWEVEWSGEDVYTAVSYKDISRTGTDGAFGYNNKSWSLVCY
SGGYCFIHNNVVTKVSGPQSSRVGVDLDHKAGTLSFYSVSDTMTLLHRVQTTFTQPLYPG
FRVYGTAELVKL
NT seq 1659 nt   +upstreamnt  +downstreamnt
atggctcagcagggagttttgctggaccaggaccagttctgttgttctgtctgtctggat
ctactgaaggagccggtcactactgcctgtggacacagttactgtaggagctgtattgag
ggctgctgggatcaggatgttctgaaaggggtctatagctgtcctcagtgcagagagacc
ttcactccaaggcctaatctgaggaaaaataacatgttggctgagttggtggagaaactg
aagaagacaggactccaggctgctccccctcctgctctgtgctatgctggacctggagat
gtggcgtgtgatttctgcactgggaccagaaagcagaaagccctcatgtcctgtctggtg
tgtctggcctcttactgtgagactcacctccaatctcactatgaatctcctgctttgaag
aagcacaagctggtcaaagccaccgcacaactacaggagaagatctgctctcatcatgac
aaactgctggaggtttactgtcgtaccgatcagcagtgtatctgttatcagtgtgtgatg
gatgaacataaaggccatgatacagtgtcagctgcagcagagaggactgagaaacagagg
cagctggggatgagtcagcagaaagtccagcagagattccaggagagagagaaggacctg
aaggagctccaacaggctgtggagtctctcaagcgctctgcacaggcagcagtggaggac
agtgataagatctttaccgagctgatccgctccattgagagaaggcgctctgaggtgaag
gagctgatcagagcccaagagaaggctcaagtgagtcaagctgaaggactcctggagcaa
ctggagcaggagatagctgagctgaggaagagaagcactgagctggagcagctctcacac
acagaggatcacatccatttcctccagagttatcagtctctctccggtaccactgtatct
tcagacttacccagcatcgttgtccgtcctcttcagtactttggagatgtgagtaagact
gtgtctgaactgagagagaaactagaagacgtccttaaaggagaatggaccaagatctcc
actacagtgaatatagtggatgttgtactgcctccagagcccaagaccagagaacagttc
ttacaatattcctgtcagctcacactggacccaaacacagcaggcacacacctctctctg
tctgaagggaacagaaaggtgacctatacagaccaagtccaaccatatcctgttcatcca
gacagattcaccaactggtgccaggttctgtgtagagagggtctgtctggacgctgttac
tgggaggtggagtggagtggggaggatgtttatacagcagtctcatataaagacatcagc
agaacagggacagatggtgcatttggatacaataacaagtcctggagtttagtgtgttat
agtggtggttattgtttcatacacaataatgttgtgactaaagtatcaggccctcagtcc
tccagagtaggagtggacctggatcacaaggcaggtactctgtccttctacagtgtctct
gacacaatgaccctcctccacagagtccagaccacattcactcagcccctctatcctggg
tttagggtctatggtactgctgagctggttaaactgtag

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