Coregonus clupeaformis (lake whitefish): 123485391
Help
Entry
123485391 CDS
T08357
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K28076
finTRIM family protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
123485391
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
123485391
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRIM_CC
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4_2
zf-C3HC4
U-box
zf-C3HC4_3
ANCHR-like_BBOX
Fib_alpha
zf-RING_2
DUF8516
ZapD
YscO-like
DASH_Dad3
DUF8604
Y1_Tnp
PIN_8
GPG1
Spc29
V_ATPase_I
DUF8567
Motif
Other DBs
NCBI-GeneID:
123485391
NCBI-ProteinID:
XP_045072243
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MAQQGVLLDQDQFCCSVCLDLLKEPVTIPCGHSYFWSCIEGCWDQDVLKRVYSCPQCRET
FTPRPILRKNNMLAELVEKLKKTGLQAAPPPALCYAGPGYVVCDFCTGTRKQKALMSCLV
CLASYCETHLQPHYESPAFKKHKLVKATAQLQEKICSDHDKLLDVYCCTDQQCICYLCTM
DEHKGHDTVSAAAERTEKQRQLGMSQQKVQQRFQERAKELKELKQAVESLKSSAQAAVVD
SDKIFTELIRSIERRRSEVKELIRAQEKAQVSQAEGLLEQLEQEIAELRKRSTELEQLSH
TEDHIHFLQSYQSFSSTSVSSDLPSIVVRPLQYFGDVSKTVSELREKLEDVLKGEWTKIS
TTVNIVDVVLPPEPKTREPLLQYSCQLTLDPNTAHKRLSLSEGNRKVTYTDQFQPYPDHP
DRFTNMYQVLCREGLSGRCYWEVEWSGELVYTAVSYKDISRTGAGSAFGYNNKSWRLECY
RGGYLFRHNNVVMTVSGPQSSRVGVYLDHKAGTLSFYSVSDTMTLLHRVQTTFTQPLYPG
FWLYTEEMTLCYNVK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcagggagttctgctggaccaggaccagttctgttgttctgtctgtctggat
ctactgaaggagccggtcaccatcccctgtggacacagttacttttggagctgtattgag
ggctgctgggatcaggatgttctgaaaagggtctatagctgtcctcagtgcagagagacc
ttcactccaaggcctattctgaggaaaaataacatgttggctgagttggtggagaaactg
aagaagacaggactccaggctgctccccctcctgctctgtgctatgctggacctggatat
gtggtgtgtgatttctgcactgggaccagaaagcagaaagccctcatgtcctgtctggtg
tgtctggcctcttactgtgagactcacctccaacctcactatgaatctcctgctttcaag
aagcacaagctggtcaaagccactgcacaactacaggagaagatctgctctgatcatgac
aaactactggatgtttactgttgtaccgatcagcagtgtatctgttatctgtgtacaatg
gatgaacataaaggccatgatacagtgtcagctgcagcagagaggactgagaaacagagg
cagctggggatgagtcagcagaaggtccagcagagattccaggagagagcgaaggagctg
aaggagctcaaacaggctgtggagtctctcaagagctctgcacaggcagcagtggtggac
agtgataagatctttactgagctgatccgctccattgagagaaggcgctctgaggtgaag
gagctgatcagagcccaagagaaggctcaagtgagtcaagctgaaggactcctggagcaa
ctggagcaggagatagctgagctgaggaagagaagcactgagctggagcagctctcacac
acagaggatcacatccatttcctccagagttatcagtctttctccagtaccagtgtatct
tcagacttacccagcatcgttgtccgtcctcttcagtactttggagatgtgagtaagact
gtgtctgaactgagagagaaactagaagacgtccttaaaggagaatggaccaagatctcc
actacagtgaatatagtggatgttgtactgcctccagagcccaagaccagagaaccgttg
ttacaatattcctgtcagctcacactggacccaaacacagcacacaaacgcctttctctg
tctgaagggaacagaaaggtgacctatacagaccaattccaaccatatcctgaccatcca
gacagattcacaaacatgtaccaggttctgtgtagagagggtctgtctggacgctgttac
tgggaggtggagtggagtggggagttggtttatacagcagtctcatataaagacatcagc
agaacaggggcaggtagtgcatttggatacaataacaagtcctggaggttagagtgttat
agaggtggttatttgttcagacacaataatgttgtgatgacagtatcaggccctcagtcc
tccagagtaggagtgtacctggatcacaaggcaggtactctgtccttctacagtgtctct
gatacaatgaccctcctccacagagtccagaccacattcactcagcccctctatcctggg
ttttggctctacactgaagaaatgacactttgctacaatgtaaagtag
DBGET
integrated database retrieval system
