Coregonus clupeaformis (lake whitefish): 123485391
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Entry
123485391 CDS
T08357
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
123485391
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
123485391
BRITE hierarchy
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4_2
zf-C3HC4
U-box
zf-C3HC4_3
zf-RING_2
Fib_alpha
ZapD
YscO-like
Y1_Tnp
DASH_Dad3
Spc29
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
123485391
NCBI-ProteinID:
XP_045072243
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MAQQGVLLDQDQFCCSVCLDLLKEPVTIPCGHSYFWSCIEGCWDQDVLKRVYSCPQCRET
FTPRPILRKNNMLAELVEKLKKTGLQAAPPPALCYAGPGYVVCDFCTGTRKQKALMSCLV
CLASYCETHLQPHYESPAFKKHKLVKATAQLQEKICSDHDKLLDVYCCTDQQCICYLCTM
DEHKGHDTVSAAAERTEKQRQLGMSQQKVQQRFQERAKELKELKQAVESLKSSAQAAVVD
SDKIFTELIRSIERRRSEVKELIRAQEKAQVSQAEGLLEQLEQEIAELRKRSTELEQLSH
TEDHIHFLQSYQSFSSTSVSSDLPSIVVRPLQYFGDVSKTVSELREKLEDVLKGEWTKIS
TTVNIVDVVLPPEPKTREPLLQYSCQLTLDPNTAHKRLSLSEGNRKVTYTDQFQPYPDHP
DRFTNMYQVLCREGLSGRCYWEVEWSGELVYTAVSYKDISRTGAGSAFGYNNKSWRLECY
RGGYLFRHNNVVMTVSGPQSSRVGVYLDHKAGTLSFYSVSDTMTLLHRVQTTFTQPLYPG
FWLYTEEMTLCYNVK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcagggagttctgctggaccaggaccagttctgttgttctgtctgtctggat
ctactgaaggagccggtcaccatcccctgtggacacagttacttttggagctgtattgag
ggctgctgggatcaggatgttctgaaaagggtctatagctgtcctcagtgcagagagacc
ttcactccaaggcctattctgaggaaaaataacatgttggctgagttggtggagaaactg
aagaagacaggactccaggctgctccccctcctgctctgtgctatgctggacctggatat
gtggtgtgtgatttctgcactgggaccagaaagcagaaagccctcatgtcctgtctggtg
tgtctggcctcttactgtgagactcacctccaacctcactatgaatctcctgctttcaag
aagcacaagctggtcaaagccactgcacaactacaggagaagatctgctctgatcatgac
aaactactggatgtttactgttgtaccgatcagcagtgtatctgttatctgtgtacaatg
gatgaacataaaggccatgatacagtgtcagctgcagcagagaggactgagaaacagagg
cagctggggatgagtcagcagaaggtccagcagagattccaggagagagcgaaggagctg
aaggagctcaaacaggctgtggagtctctcaagagctctgcacaggcagcagtggtggac
agtgataagatctttactgagctgatccgctccattgagagaaggcgctctgaggtgaag
gagctgatcagagcccaagagaaggctcaagtgagtcaagctgaaggactcctggagcaa
ctggagcaggagatagctgagctgaggaagagaagcactgagctggagcagctctcacac
acagaggatcacatccatttcctccagagttatcagtctttctccagtaccagtgtatct
tcagacttacccagcatcgttgtccgtcctcttcagtactttggagatgtgagtaagact
gtgtctgaactgagagagaaactagaagacgtccttaaaggagaatggaccaagatctcc
actacagtgaatatagtggatgttgtactgcctccagagcccaagaccagagaaccgttg
ttacaatattcctgtcagctcacactggacccaaacacagcacacaaacgcctttctctg
tctgaagggaacagaaaggtgacctatacagaccaattccaaccatatcctgaccatcca
gacagattcacaaacatgtaccaggttctgtgtagagagggtctgtctggacgctgttac
tgggaggtggagtggagtggggagttggtttatacagcagtctcatataaagacatcagc
agaacaggggcaggtagtgcatttggatacaataacaagtcctggaggttagagtgttat
agaggtggttatttgttcagacacaataatgttgtgatgacagtatcaggccctcagtcc
tccagagtaggagtgtacctggatcacaaggcaggtactctgtccttctacagtgtctct
gatacaatgaccctcctccacagagtccagaccacattcactcagcccctctatcctggg
ttttggctctacactgaagaaatgacactttgctacaatgtaaagtag
DBGET
integrated database retrieval system
