Clostridium cochlearium: SAMEA4530647_0123
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Entry
SAMEA4530647_0123 CDS
T06756
Symbol
ccpA_1
Name
(GenBank) catabolite control protein A
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
ccoh
Clostridium cochlearium
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccoh03000
]
SAMEA4530647_0123 (ccpA_1)
Transcription factors [BR:
ccoh03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SAMEA4530647_0123 (ccpA_1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_Tnp_ISL3
Trp_repressor
HTH_7
HTH_3
Phage_sheath_1
HTH_31
HTH_Crp_2
HTH_IclR
HTH_23
Motif
Other DBs
NCBI-ProteinID:
SNV64085
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All DBs
Position
1:112604..113602
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AA seq
332 aa
AA seq
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MPASIKDVAREAGVSIATVSRVLNDIDVVNEDTKKKVLAAIKKLGYRPNIVARSLKTQRT
STIGIIVPDISNQFYPEIVRGAEDVANIYEYNIMLCNTDLDTEKEKEYLRVLKEKMTDGV
LYMSNSLENETVELIKELNIPTVLVETTDENKDFPSVSIDNKKAAYEAVEYLISKGNKTI
AYIGPKDEKNNAGALRYKGYKESLEKNNIKIRESLIYISGMKAGDGYEGMKHILKEESID
SVFCASDEIAMGAINALRDNGLKVPEDVDVIGFSNIYSASIFYPKLTTIAQPMYDMGSVG
MRMLIKIINKEQLEKEHYVLNYSLIERDSCKK
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgccagcatcaataaaagacgtagctagggaagctggagtatctatagctacagtatca
agagtgttaaatgatatagatgtagttaatgaagatactaaaaagaaggtattagctgca
ataaaaaaattgggttatagacctaatatagtagcaagaagtttaaagactcaaaggaca
agtaccataggaataattgttccagatatatctaatcaattttaccctgaaatagtaagg
ggagctgaagatgtagctaatatatatgaatataatataatgttatgtaatacagattta
gatacagaaaaagagaaagaatatttaagagtattgaaagaaaaaatgactgatggagtc
ctttatatgagtaattctttagaaaatgaaactgtagaattaataaaagaattaaatatt
cctacggtactagtggaaacaacagatgaaaataaggatttcccaagtgtaagtatagat
aataaaaaagcagcatatgaagcagtggaatatttaataagtaaagggaataaaacaatt
gcatatataggtcctaaagatgaaaaaaataatgcaggtgcacttagatataagggatat
aaagaatctttagaaaaaaataatataaaaataagagaaagtttaatttatatatctgga
atgaaagcaggagatggctatgaaggtatgaaacatatacttaaagaagaatccatagat
agtgttttttgtgctagtgatgaaattgccatgggagcaataaatgccctaagagataat
ggattaaaggtgccagaagatgtagatgtaatcgggtttagtaatatatattcagcgtct
attttttatcctaaacttacaactatagcacaacctatgtacgatatggggtcagtagga
atgagaatgcttataaaaattataaataaagaacaattggaaaaagaacattatgtatta
aattatagtcttatagaaagagattcatgtaaaaaataa
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