Campylobacter coli RM5611: YSU_03805
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Entry
YSU_03805 CDS
T03167
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
ccoi
Campylobacter coli RM5611
Pathway
ccoi00300
Lysine biosynthesis
ccoi01100
Metabolic pathways
ccoi01120
Microbial metabolism in diverse environments
ccoi01230
Biosynthesis of amino acids
Module
ccoi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ccoi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
YSU_03805
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccoi01002
]
YSU_03805
Enzymes [BR:
ccoi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
YSU_03805
Peptidases and inhibitors [BR:
ccoi01002
]
Metallo peptidases
Family M20
YSU_03805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M42
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
AHK74996
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All DBs
Position
747599..748699
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AA seq
366 aa
AA seq
DB search
MNAKEFLIELLKFKSVTPNDDGALNFIAMELSDFEAFFIEKKGIKNLLLTKKFKDEGEHL
AFGGHVDVVPAGEGWKNDPFEPLEEEGFIYARGAQDMKSGVAAFVDAVKNADFKGARLSL
ILTSDEEGEAIYGTKAVLEWMQERDMLPDYAVVAEPTCVKKIGDSIKIGRRGSINGKLLI
RGKQGHAAYPEKCINPVHDFAPVLKLLAGFDLDPGSAEFSPSKIVITDIRGGMGVCNVTP
NDLKLMFNVRNSPDTSLEDVKSYVEKICHGLNYELELKQSSEPFLTSIDNKIVQKMNESV
QKITHEVPELNTKGGTSDARYFAKYGVKVVEFGVCNDRIHAIDERVSIEEFEKLCLVFKD
LVENFN
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaaaagaatttttaatcgaacttttaaaatttaaatctgttacgccaaatgat
gatggagctttaaatttcatcgctatggaactgagtgattttgaagctttttttatagaa
aaaaaaggcattaaaaaccttttactcactaaaaaatttaaagatgaaggcgagcattta
gcttttggtgggcatgtagatgtcgttcctgcgggtgagggttggaaaaatgatcctttt
gagcctttggaggaagaaggctttatctatgcaaggggtgctcaagatatgaaaagcgga
gtagcagcctttgtggatgcggtaaagaatgcggattttaaaggagcaagactgagtctt
attttaacaagtgatgaagaaggcgaagctatatatggaactaaggctgttttagaatgg
atgcaagaaagagatatgctacctgattatgctgtggttgcagagccaacctgtgttaaa
aaaatcggcgatagtattaaaatagggcgtcgtggttctatcaatggtaagcttttgata
cgcggaaaacaaggacatgcggcttaccctgaaaaatgtatcaatcctgtgcatgatttc
gcaccggttttaaaacttttagcgggttttgatcttgatccaggtagtgctgaatttagc
ccttcaaaaatcgttataactgatattcgcggaggtatgggggtgtgtaatgttactcca
aatgatttaaaacttatgtttaatgtacgcaattcccctgatacaagcttagaagatgta
aaaagttatgtagaaaaaatttgtcatggtttaaactatgagttagagctaaaacaatca
agcgaaccttttttaacaagcattgacaataaaatcgtacaaaagatgaatgaaagcgtg
caaaaaatcactcatgaagtaccagagctcaataccaaaggtggcacaagcgatgcgaga
tattttgcaaaatatggcgttaaggtggttgaatttggcgtttgtaatgatagaattcac
gctattgatgaaagggtaagtatagaagaatttgaaaaactttgtcttgtttttaaagat
ttggtggagaattttaactag
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