Coprococcus comes: I6K69_02895
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Entry
I6K69_02895 CDS
T07118
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ccom
Coprococcus comes
Pathway
ccom03420
Nucleotide excision repair
ccom03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I6K69_02895
03430 Mismatch repair
I6K69_02895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccom03400
]
I6K69_02895
Enzymes [BR:
ccom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I6K69_02895
DNA repair and recombination proteins [BR:
ccom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I6K69_02895
MMR (mismatch excision repair)
Other MMR factors
I6K69_02895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
ResIII
DEAD
AAA_14
AAA_11
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QRT50268
LinkDB
All DBs
Position
complement(527468..529330)
Genome browser
AA seq
620 aa
AA seq
DB search
MKLNRGQDEAIKHGNGPCMVLAPPGSGKTLIVTERTRYLIEESGVRPDQILVITFTRYAA
REMKERFERLTAGKNYPVTFGTFHSIFYGILKCAYGIGANNLMSEKESSVLLQEVLDQTN
IESTPEVEDEEELVRELLREVGMVKNGLYHLKDFHSKYLTQDEFAEVFRSYEHQKKELKK
FDFDDMLVQCYALFRKKPEILQGWQKRFQYILIDEFQDINRVQYEVIRMLAAPRYNLFVV
GDDDQSIYGFRGAKPELMLYMKQEFPSLRTISLTVNYRSTEFITGAAARVILHNDTRFYK
RVQSFRGRGQNVHVQEVLDEQEEAQYVTEEIQKKLDQGIKPGEIAVLFRAAVQARMISEI
LSEHRIPFEMRDYVTNFYRHFIVKDMMAYLQLAAGKRDRSLFLTICNRPLRYLARNSMEN
RQVNFEDLRKFYCDKDWMLDIIDQFDVDVRMMKNMAPYAAIQYIRKKIGYDDFLKEYAEK
HQISWKQLMDVMAELEERSKNFKSYDEWEIHIAKYTQELEEQQAKARKIKGERENKVQLM
TIHSAKGLEFEDVFVIHANEGEIPHQKAEKKDEIEEERRLFYVALTRAKNNLCISYITQK
NGNSIKPSRFVEELLGQRIK
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaaacagaggacaggatgaagcgataaagcacgggaatggaccgtgtatggtg
ctggcacctccgggttcgggaaagacgcttattgtcacagaacgtacccgttatctgatc
gaggagagcggagtacgcccggatcagattcttgtaattacttttacaagatatgcagca
cgtgaaatgaaagaacgttttgaaaggctgactgccggaaaaaattatccggtaacgttt
gggacctttcacagtattttttatgggattctaaaatgtgcctatgggattggtgcgaat
aatctgatgtctgaaaaagagtcctctgtacttttacaggaggtcttagaccagaccaat
atcgaatcaacacctgaagtagaagatgaagaggaactggtgagagaacttctgcgggaa
gtcggcatggtaaagaacggactttatcatctgaaagattttcacagtaagtatcttaca
caagatgagtttgcagaagtgttccgcagctatgagcatcagaaaaaagaactgaaaaaa
tttgattttgatgatatgctggtacagtgttatgcacttttccggaaaaagccggagatt
ctgcaaggatggcagaagcgttttcagtatatcctgatcgatgaattccaggatatcaac
cgtgtgcagtatgaagtgatccggatgcttgcagcaccgaggtacaatttgtttgtagtc
ggggatgatgatcagtccatttatggatttcgtggagcaaagccggagctgatgctttat
atgaagcaggaattcccgtcacttcggaccatttcgctgacggtgaattatcgttctacc
gaatttattaccggagcagcggcaagagtgattttgcataatgatacccgtttttacaag
cgtgtacagtcatttcggggaagaggacagaatgttcatgtgcaggaagtcctggatgaa
caggaagaggcgcagtatgtaacggaagagatccagaaaaaactggatcagggaataaag
ccgggagaaattgctgtgcttttccgggcagcagtccaggcgcgaatgatttcggaaata
ttaagcgaacaccgtatcccgtttgaaatgcgagattatgtgaccaatttttacaggcat
tttattgtaaaagatatgatggcatatctgcagttggcagcaggaaagcgggacaggtcg
cttttcctgacgatctgtaaccgaccgctcaggtatctggcacggaacagtatggagaac
cggcaggtaaattttgaggatctgcgtaaattttattgcgataaggactggatgctggat
attattgaccagtttgatgtggatgtccgtatgatgaagaatatggcaccttatgcggca
atccagtatatccggaaaaagatcggatatgatgatttcctgaaagaatatgccgaaaaa
catcagatttcgtggaagcagctgatggatgtgatggcagagcttgaggagaggagtaaa
aacttcaaatcctatgatgaatgggaaatccatattgcaaaatatacgcaggagctggaa
gaacagcaggcaaaggcaaggaagatcaaaggagagcgggagaataaggtacagctgatg
acgatccattcagcgaaaggactggaatttgaggatgtatttgtgatccatgccaatgag
ggtgagattccgcatcagaaggcagaaaagaaagatgagattgaagaagagagaagactt
ttttatgtagcactaacccgtgcgaagaataatctctgtatttcctatattacacaaaaa
aacgggaacagtatcaaaccgtcccgttttgtggaagagcttttaggtcagagaataaaa
taa
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