Campylobacter corcagiensis: CCORG_1158
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Entry
CCORG_1158 CDS
T06832
Name
(GenBank) UvrD/REP family helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ccor
Campylobacter corcagiensis
Pathway
ccor03420
Nucleotide excision repair
ccor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CCORG_1158
03430 Mismatch repair
CCORG_1158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccor03400
]
CCORG_1158
Enzymes [BR:
ccor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CCORG_1158
DNA repair and recombination proteins [BR:
ccor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CCORG_1158
MMR (mismatch excision repair)
Other MMR factors
CCORG_1158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
DUF2340
PhoH
AAA_11
CarD_TRCF_RID
eIF3_p135
Motif
Other DBs
NCBI-ProteinID:
QKF65007
LinkDB
All DBs
Position
1124963..1127035
Genome browser
AA seq
690 aa
AA seq
DB search
MRDILKGLNDEQKIAATHIDGPMLILAGAGSGKTKTITTRLAYLIQNGIPPHSTLTLTFT
NKAANEMRSRALKLLDGLKLDSNPLLCTFHKFGLLFLKFYISELGRKNNFLIIDTDDKKK
IIKSFESSLTTSVLANEISKMKNSLVSVEEAIENSKLIGSDIGSESTMSGFYQKVAEIYK
LYEETLKRDNLVDFDDLLVLPYKILEANKKLCDEISRRYQFIMVDEYQDTNDIQIKLLKK
LCSSHSNLCVVGDDDQSIYGWRGARIENILNFKDQFENVKIIKLENNYRSTSNILAAANN
LIDCNTNRLGKKLVSTKDKGSEIELYESDDENFEANRISKQIVTLVNSGIDPKNIAVLYR
VNALSRALEDGLARAKIPYKMVGGIKFYERAEIKDAISYIRLILNHNDDFSLRRIINRPK
RGLGKVGLANIEKIAFENKMSIFDTLSNLENSSVSKKSIKELSQLANSISYLSSVENDYD
MLDELEKHIGLKEYYKSLPDGDDRVANIDEFTALLKDELTNNPNFDLEEFLNELSLQSDQ
DQVSNEAISIMSVHASKGLEFEHLFVIGLEEGFFPLIGDHTDIEEERRLAYVAITRAKKT
LVLSRANSRFYRGKRERLEKSRFLSEAGLIESALVFEKSTDFKKGDLVKHKLFGMGRVIS
VKKLTNDSNLAINFGGITRNILSSFVEKVV
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgagagatattttaaaaggcttaaatgacgaacaaaaaattgcagcaacacatatagat
ggacccatgctgatactagcaggagctggaagtggcaagacaaaaaccattactactcgc
cttgcctatctcatccaaaacggcattccacctcattctaccctaactttaacatttact
aataaagctgcaaatgagatgaggagcagagctttaaagctccttgatggcttaaaacta
gactcaaaccccctactttgcacatttcataaatttggactgctgtttttaaaattttat
ataagcgaacttggaagaaaaaataactttcttataatagacactgatgataaaaagaaa
attataaaaagctttgaaagttcacttacaacaagcgtgcttgcaaatgaaatctcaaag
atgaaaaactctttagtaagcgttgaagaagctatagaaaactcaaaattaattggatct
gacataggctctgaaagtacaatgtcaggtttttaccaaaaagtagctgaaatttataaa
ctttacgaagaaactttaaaaagagataatctagtagattttgatgatttgctagtttta
ccatacaaaattttagaagctaataaaaaactctgcgatgaaatttcaagacgatatcag
tttataatggtcgatgagtatcaagacacaaatgatatccagataaaacttcttaaaaaa
ctctgctcttctcactcaaatttatgcgttgtgggcgatgatgatcaaagtatttatggc
tggagaggtgcgaggatagaaaatatcttaaattttaaagatcagtttgaaaatgtaaaa
atcataaaactagaaaacaactaccgctccacttcaaatatcttagctgcggcaaataat
ttgattgattgcaacacaaaccgccttggtaaaaaactagtcagcacaaaagacaaagga
agcgaaattgagctatatgaaagcgatgatgaaaatttcgaggcaaatagaatttcaaaa
caaatagtaactcttgtaaattctggaatagatccaaaaaatatagccgttttgtataga
gtaaatgctctttctcgtgcattagaagatggtttagcaagagcaaaaattccatacaaa
atggtaggtgggatcaaattctatgaaagagctgagataaaagatgcaataagctacata
agacttatcttaaatcacaatgatgatttttcacttcgacgcattatcaaccgcccaaaa
agaggtcttggaaaggttggcttagcaaatatagaaaaaatagcttttgaaaataaaatg
tctatttttgatacactttcaaatttagaaaactctagcgttagtaaaaaaagcataaaa
gaacttagccagctagcaaatagcatatcttatctatctagcgttgaaaatgattacgat
atgcttgatgaacttgaaaagcatataggtcttaaagagtactacaaaagccttcctgat
ggcgatgatagagttgcaaacatagatgagtttacggctttacttaaagatgaactaact
aataatccaaattttgacttagaagaatttctaaacgaactaagccttcaaagcgatcaa
gatcaagtatcaaacgaagctatatcaataatgagtgttcatgctagcaaaggacttgag
tttgaacatctttttgttatcggacttgaagagggctttttcccgcttattggcgatcac
acagacattgaagaagagcgccgccttgcttatgtagctataactagagctaaaaaaact
ctagttttaagtagagcaaactcaagattttatcgtggtaaaagagaaaggcttgaaaaa
agcaggtttttaagcgaagctggacttattgagagtgctttggtatttgaaaaaagcact
gattttaaaaaaggcgatcttgtaaagcacaaactctttggaatggggcgagttataagc
gttaaaaagcttacaaatgactcaaatttagctataaattttggtggaattacaagaaac
attctttcaagttttgttgaaaaggttgtttaa
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