Corynebacterium confusum: CCONF_01210
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Entry
CCONF_01210 CDS
T09352
Symbol
rfbC
Name
(GenBank) putative dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K23987
dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:
5.1.3.13
1.1.1.133
]
Organism
ccou
Corynebacterium confusum
Pathway
ccou00521
Streptomycin biosynthesis
ccou00523
Polyketide sugar unit biosynthesis
ccou00541
O-Antigen nucleotide sugar biosynthesis
ccou01100
Metabolic pathways
ccou01110
Biosynthesis of secondary metabolites
ccou01250
Biosynthesis of nucleotide sugars
Module
ccou_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccou00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CCONF_01210 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CCONF_01210 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CCONF_01210 (rfbC)
Enzymes [BR:
ccou01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
CCONF_01210 (rfbC)
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CCONF_01210 (rfbC)
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Motif
Pfam:
RmlD_sub_bind
dTDP_sugar_isom
Epimerase
GDP_Man_Dehyd
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
WJY88805
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All DBs
Position
complement(245087..246457)
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AA seq
456 aa
AA seq
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MDIRTTGIEGLLIVDLDVHGDDRGWFKENWQREKMVAAGLPDFAPVQNNVSFNATAGVTR
GLHAEPWDKLVSVAYGKVFGAWCDLREGSETYGELVTTEIGPDTAVFVPRGVANGFQALE
LTAYSYLVNDHWSPEASYPAVNLDLVDWPLEPTEISDKDAAHPQLSEATPMPPRKVLVTG
ADGQLGRAFRRILPHAEFATRADLDITDPHLAEARRWRDYSAIINCAAYNNVDGAERDRA
TAWAVNAQAVARLAGIASAHNLTLVHVSSDYIFDGTEKVHSEQEEVSPLSVYGASKAAGD
AAAQATARHYVVRTSWVFGDGNNFVEAMRGLALRGVEPEVVADQRGRPTFAEDLAKAIAH
LLDSGAEYGVYNVTNSGDTVGRDELAMATFIGIGHDPAEVRPTTTDHFAQPGAAPRPAES
TLDLSKLEATGFRPQNWRAALALYLALYPAAGEAES
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggacattcgcaccacgggcatcgagggactcctcattgtggacttggacgtccacggg
gatgaccggggctggttcaaggagaactggcagcgggagaagatggtggcggccggcctc
cccgacttcgcgccggtccagaacaacgtctccttcaacgcgaccgccggggtgacccgg
ggcctgcacgccgagccctgggacaagctggtctctgtcgcctacggcaaggtcttcggg
gcctggtgcgatctgcgggaagggtccgagacctacggcgagttggttaccaccgagatt
ggccccgacacggccgtcttcgtcccccgcggggtggccaacggcttccaagccctggaa
ctgaccgcctattcctacctggtcaacgatcactggtccccggaggcgtcttacccggcc
gtcaacctcgacctggtggactggccgctggagccgaccgagatctccgacaaggacgcg
gcccacccgcaactttccgaggcgaccccgatgcccccgcgcaaggtcctagtcaccggc
gccgacgggcagctcgggcgcgccttccggcggatcctgccccacgccgagttcgccacc
cgggccgatctcgacatcaccgacccccacctcgccgaggcccgccgctggcgcgactat
tccgcgatcatcaactgcgccgcctacaacaacgtcgacggggccgagcgcgatcgcgcg
accgcctgggccgtcaacgcgcaggcggtggcgcggctggccggcatcgctagcgcccac
aacctgacgctggtgcacgtcagcagcgactatatcttcgacggcaccgagaaggtccac
tccgagcaggaggaggtgagcccgctgagcgtgtatggggcatcgaaggcggctggcgat
gccgccgcccaggccaccgcccgccactacgtggtccgcaccagctgggtcttcggcgac
ggcaacaacttcgtcgaggccatgcgcggcctcgccctgcgcggggtggagcccgaggtc
gtcgccgatcagcgcggccgccccaccttcgccgaggacctggccaaggccatcgcccac
ctgctggactccggggccgagtacggcgtctacaacgtcaccaactcgggcgacaccgtc
gggcgggacgagctggcgatggccaccttcatcggcatcgggcacgatccggccgaggtc
cgcccgaccaccaccgatcacttcgcccagcccggcgcggccccgcgcccggccgagtcg
accctcgatctgagcaagctggaggccaccggcttccggccccagaactggcgggccgca
ctggccctctacctggcgttgtacccggccgccggggaagcggaaagctag
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