Chondrus crispus (carragheen): CHC_T00002083001
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Entry
CHC_T00002083001 CDS
T02916
Name
(RefSeq) hypothetical protein
Organism
ccp
Chondrus crispus (carragheen)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
TRCF
ResIII
CarD_TRCF_RID
DUF3638
AAA_30
TsaE
Motif
Other DBs
NCBI-GeneID:
17320713
NCBI-ProteinID:
XP_005712989
UniProt:
R7Q730
LinkDB
All DBs
AA seq
964 aa
AA seq
DB search
MSSQSETPSVPCPVHVAFVPSTAFIPRFRTHSRTSSLSNRTTTRRPRPTSCPVVFCTEAS
IPDDDFFLPLDDLNLLKNSTIHGTTSSSANQTSLATKRVNAKRLQISRNTSKDRDDEDET
LRSQIVDEKLSAADLFGTVDAATSPAAPTSPPHLGRFKPQQQKTNESLLIPQSPSQNARV
SSSGVRAKTTTRKPQKRTEPQTTLYPARRNASGVIDISATRQPKRKTPSPLPSDDATVRP
GDLVSHSRHGIGRFRGVERTVSTTAPTTPGAPRPLQEYAVIEYRDGDVYVPFSHFEVIRR
LSDLEMQTFDRLDTISGSATYYNSSKASRSKRSKHVARERTRAKIRKQLINLHGLYAERT
TIERPPFPVDEEAEQRFNLECGFVLTEDQEAATKQIMRDMSKNRRPMDRLLCGDVGFGKT
EVAVRAAFRVLAAGKQVAILAPTTILAQQHYDTFRSRFEGASVKIAMACMTRFTSRKINI
ENRDRVCSGEVRVAIGTHMLLNDKCIFPDLGLLIVDEEHRFGVNQKEKIRARYRGIDALF
MSATPIPRTLHLTLSGLRDASVLRTPPPGRKPVITKVSPSGAGIVRAAITREVERGGQVF
FVVPRIEGIEALADWVRDLFPGLKVLVAHGSINDLEHRIWAFAQKEYDVLVCTTIIENGI
NMPDVNTIIVQDAGKFGLAQLHQLRGRVGRSDVQAYAFLLYASSGACQAVHTLDRLRALE
RYSDLGAGFAIAQRDMEMRGVGTILGVEQHGNNSIEGEEYAMMLSEELEHARTGKPIPVA
MPNPVTSTEVYLPIASLIPADYITDFDQKMTAYGQLSRALSMKAVNSVVKGLESRYGPLP
TSTRRHVSVMELKLSGKPLGITRIFAERQHVILEWPIDEPAFNCLVAFLPDKQSRDRCEH
KVDEERVIIRGLGICSGDVQLAKLRVYLNCFNKAASGLLRQSDRYQPDPTELVDTLHQIE
ADKE
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcacaatctgaaacgccttcagttccctgtcccgttcatgtcgcatttgtcccc
tccactgcatttattcctcgtttccgcacccactcgcgcacatcctcgctctccaatcgc
accaccacgcgtcggccccgtccaactagctgtccggtcgtcttctgcacagaagcctcc
attcccgatgacgacttctttctgccattggatgacctcaatttgctgaagaacagcacg
attcacggcacgacgtcctcctctgccaaccaaacgtccctcgcgaccaaaagagtaaac
gccaagcgtcttcaaatctctcggaatacctcgaaagaccgtgacgatgaagacgaaacc
cttcgttcccagattgtcgatgaaaaactctccgccgccgatctctttggaactgttgac
gccgccacatccccggctgcacctacttcaccgccacacttaggccgctttaaaccgcag
cagcagaaaacaaacgaatccctactcattccgcagtccccatcgcaaaatgcccgtgtg
tcgtcttcaggcgtccgggcaaagactacaactcggaagcctcaaaagcgaaccgaacca
caaactacgctatatccggcgagaaggaatgcatccggggtcattgatatttctgcgaca
aggcagccaaagaggaagactccctccccgttgccaagtgatgatgctaccgttcgtcca
ggtgatttagtttcgcattcccgccatggcattggtcgttttcgaggtgtcgagcggact
gttagcaccacagccccgacaacgcctggtgcgcctcgtcctcttcaggaatatgctgtt
attgaatatcgcgatggcgacgtctatgttccattctcacatttcgaggttattcgacgc
ctatctgatctcgaaatgcaaaccttcgatcgacttgatacgatttccggttcggcaacg
tattacaattcttctaaagcttcacgtagcaaacgctcaaaacacgtggctagagaacgg
acacgcgccaagataaggaagcaacttattaatctccatggcctgtatgcggagagaaca
acaatcgaacgacccccatttcctgttgatgaagaggcagaacaaaggtttaatttggag
tgcgggtttgtcctcaccgaggaccaggaggccgcaacaaaacagatcatgagagacatg
agcaagaatcggcgccccatggaccgattgctttgcggtgatgtggggtttggaaaaacc
gaagttgcagttcgagcggcgttccgggtcttggcagctgggaagcaagtcgccatcctt
gcccccactacaattttggcgcagcaacactacgatacttttcgaagcagatttgaaggg
gcctccgtcaaaatcgcaatggcctgcatgaccagatttacttcacggaagataaacatt
gagaacagagatagagtatgctctggagaggttcgcgtcgccataggcactcacatgttg
ctcaacgacaaatgtatttttccagacctgggcttgctgatcgttgacgaggaacataga
tttggagttaatcaaaaggagaagattcgagctcgataccgcggtattgatgcgctcttt
atgtcagctacgccaattccacgcacattgcaccttaccttgagcggtcttcgcgacgct
tctgtcctaaggacacccccacctggcagaaaaccggttatcaccaaagtatctccatct
ggtgcaggaatagtaagggcagctatcacccgggaggttgagaggggtggtcaagtgttc
tttgtggtaccaaggattgaaggcattgaagctttggctgactgggtccgggacttgttt
cctggacttaaggtactagttgcgcatggttctatcaatgatttggaacatcggatatgg
gcctttgcacagaaggaatacgatgtactcgtatgcacaacaattattgagaatggtatc
aatatgccagatgtcaacaccattattgtacaggacgcgggcaagttcggactggctcag
cttcatcaactgcgcggtcgcgttggacgctctgatgttcaagcttatgcctttctgctg
tatgcttcatcgggggcgtgccaggctgttcacacgcttgatcgattgcgtgctctggaa
agatacagcgatttaggagcagggtttgcaattgcacagagggacatggagatgcggggc
gtaggtaccattttaggagttgagcaacacgggaacaattccattgaaggggaggagtac
gcgatgatgctgtctgaagaacttgagcacgctcgaaccggaaagccaattccagtagca
atgccaaatcctgtgacatcaacagaagtgtatcttccaattgcatcgctcattcccgca
gattatataactgattttgatcaaaagatgactgcgtatgggcagttgtcccgggccctg
tcaatgaaggctgtcaatagcgttgtcaagggccttgagagtcggtacggacctctgccg
acctcaaccaggcgtcatgtgagcgtcatggaattaaagttgagtggaaagcctctggga
ataactaggatttttgctgagagacaacatgttattctggaatggccaattgacgaaccc
gcgttcaactgcttggtagcttttttgcctgataagcaatcaagagatcgctgtgagcat
aaagtggacgaagagcgtgttataattaggggccttggcatctgcagcggtgatgtgcag
cttgccaagttgcgagtgtatttgaattgcttcaacaaagcagcttctggtcttcttcga
caatcggacagataccaaccagatcccacagaactcgttgacacccttcatcaaatagaa
gcggacaaagagtga
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