KEGG   Chondrus crispus (carragheen): CHC_T00002254001
Entry
CHC_T00002254001  CDS       T02916                                 
Name
(RefSeq) hypothetical protein
  KO
K17943  pumilio RNA-binding family
Organism
ccp  Chondrus crispus (carragheen)
SSDB
Motif
Pfam: PUF CPL
Other DBs
NCBI-GeneID: 17321012
NCBI-ProteinID: XP_005713264
UniProt: R7Q7W3
LinkDB
AA seq 1141 aa
MQNNPPHPPPSSQSSSQNPLRHHDSPFPPLDPFRYPSNGNSSLVRSESAPINILEENSHP
SSHHISDLSNLSISARQPSPLDSDHPRSSHHHPMNFAAAAANSIQSAHTASAHSLAPFAN
RGHQQKQKHHVPTNKPPPARSLSSVELAAIVNGVSTPGVTAVPAHMSANPNATVLSASAS
AAKAAGQKKIPSNAPSNSGKPSSLGNSAPAWHKTVFDMIQEDFPKTPSNMFSSPLPPPGL
SGIQDGGQHVEHRPSGHERRARLPSTASLDIDLDRITAADLASDHGTARPADEGMRTQDL
PPRIHHRRSASINWPADLSGLRSNMSRSSSRSNVAASPPSGVYFPSKPSDIPPMSSPLSS
VVTGSGSISTGLLPAAVAASGSSSSAQSTSPTGSVRKHNVGVSSPQGSPATHLTGRSGTN
VSHVSNSTHSQMNPYSLPSTGHNANTSLSSIDDLNVPGLGNYDLFYEPSEAAALGLTPSQ
SSVFQTPTYPSSQRNMAFASGLENSHAQSLGGSSQYANVFPGMGLYPSPFSTNPSGVESG
TGVSPGYTESFRDGLAAADNLKNMSIQMAAFLSAQQQFYAAQMARMAAITGTSAFTGSPT
PYGAGAVPGGHVGHTSNAPHMRSPWDARDPTAPVYRGYPRSKHHFDQYRGGPNAGPHLSN
QKKNTGLDLGHKNRGPHGRRRNRGHEDVFLGVHKSGERVGYGNGGLSGSMQDSSHTRSAL
LEEFRATSLSIGRGIGSVGDVSLSGGFGAGSVGSSLHSGREWQLSEIKENVVEFATDQHG
SRFIQQKLESASPEDRDAILRQALTEAQRLMTDVFGNYVVQKLLDHGGANAVKLIAAELE
GRMLVLSLHMYGCRVVQKALEVLEPGARSVLVRELDGHVLKCIRDQNGNHVIQKCVELVE
PESVQFIVDSVHGQAVQLAGHSYGCRVVQRILEHGAPSQKAPIMVEIMSCITDLIKDQYG
NYVIQHVVEHGTREERSIIMNLVRGEVCDLSQHKFASNVVERCLQHGSLDERQILIEILI
MGEGDPNSSPLNHLVRDQFGNYVVQRVLDVARPPQRERVVTILRAQVPAIKKYSYGKHII
ARLEEHQSNSGSTSYHHGQGHSHNGASHGSLHRERHVSPAMMPAGVSHGLPSGPNDYIYY
G
NT seq 3426 nt   +upstreamnt  +downstreamnt
atgcaaaacaacccccctcatccccctccttcctcccaatcttcttcccaaaatcctctc
cgtcaccacgactctccgtttccgcccctcgaccccttccgctacccctccaatggcaac
tcgtccctggtcaggagtgagagtgctcccattaatattctagaggaaaactctcaccct
tcctcccaccacatctcggatctctccaatctctcaatttcggctcgtcaaccgtctcca
ttggattctgatcacccccgctcgtcgcatcatcacccgatgaattttgctgcagccgcg
gctaactccattcagtctgcgcataccgcatctgcgcactctctcgctccgtttgccaat
cgcggtcaccagcaaaagcagaagcaccacgtacctacgaacaaacccccgccggcaagg
tccctgtcttccgttgagttggctgccattgtcaacggtgtttctaccccgggagttact
gccgttccagcacacatgtcggccaatccaaacgctactgttttgtcggcttctgcctcc
gcagccaaagctgctggacagaagaagatcccatcaaatgctccttccaattcaggaaag
ccttcaagtctgggcaattctgcccccgcttggcacaaaaccgttttcgacatgatccag
gaggactttccgaagaccccgtccaacatgttttcttctcctcttcctcctcccggccta
tctggaattcaagatggcggccaacatgtagaacacaggccctctggccatgagcgaaga
gctcgtctcccgtctacggcttcattggacatagatttggaccgcatcaccgccgcggat
ttggcaagtgatcatggaaccgcgcgcccagctgacgagggaatgaggacacaagatctg
ccgccaagaatccatcatcgtcgatcggcttcgattaattggcctgctgatctctctggg
ttgcgttcaaacatgtcgaggagttcttctcgttccaacgttgcggcttctcctcccagc
ggtgtgtactttccaagcaagccttcggacattcctcccatgtcttcaccgctttcgtca
gtggtcacaggatcaggtagcatctctacggggctactcccggctgcagtcgctgcttca
ggttcgtcgtcatcggcgcagtctacgtccccgacgggttctgttcgaaagcataacgtg
ggggtgtcttccccgcaagggtcacctgctacccacctgacaggacgttcagggacaaat
gtgtcccatgtttcaaacagcacacattcccagatgaacccgtattctctaccctcaact
ggacacaacgcaaatacttcgctcagcagtatcgacgacctcaatgttccaggcctcgga
aactatgacttgttttacgagccgtctgaagcagcggcactaggcctgacgccatctcag
tcgtcagtatttcagactccgacatatccgtcgtcgcagaggaatatggcatttgcttct
ggtctcgagaattctcatgcgcagtcacttgggggtagttcccagtacgctaacgtcttc
cccggtatgggactttatccttccccgttttccacgaatccctcaggggtggaatctggc
accggggtgtcgcctggatataccgaatcatttcgtgatggtttagccgcagcagacaac
ttgaagaacatgagcatccagatggcggcctttcttagtgcccagcagcagttttacgct
gcgcagatggcgcgtatggcggccattacagggacatctgcatttaccgggagtcctacg
ccgtacggagctggtgcggtccctggaggacatgtaggccacaccagcaatgcgccacat
atgagatcgccatgggacgcgcgtgatcccactgcccccgtgtatcgtggttatccacga
tcgaagcatcattttgatcaataccgcggtggccccaatgccggtcctcaccttagcaat
cagaagaagaacacagggcttgacctgggacataaaaaccggggccctcacggaaggcgt
aggaaccgtggacatgaggacgtttttctcggtgtgcataagtctggcgagcgtgtcggg
tatggaaacggtgggcttagtggcagtatgcaagattcttctcataccagatccgctctt
cttgaagagttcagagcgacgtctttatctatcggacgtggaattggctcggtcggagat
gtcagtctgagtggcggatttggtgcgggcagtgttggatccagtcttcacagcggaaga
gaatggcagttgtctgagatcaaagaaaacgttgtggagtttgctacagatcaacatggt
tcacgcttcattcaacagaagcttgaatctgcatctcccgaggacagggacgccatattg
cggcaagccctaactgaggcacagcgactcatgacagatgtattcggaaactacgttgtc
cagaaacttctcgatcatggaggtgcgaatgctgtgaaactcattgccgcagaattggag
gggcgcatgctcgtgctctctctgcacatgtatggctgtcgggttgtgcaaaaagctctg
gaagttcttgagcctggagcgcgctctgtcttggtcagggagcttgatgggcatgtactg
aagtgcattcgggatcagaacggcaaccacgtcatccaaaaatgtgtggagttggtcgaa
ccggaatctgttcagttcatcgtagactctgtccacgggcaagctgttcagttggccggt
cattcctacggctgccgtgtagttcaaaggatcttggaacatggggctcccagtcagaag
gcacccatcatggttgaaatcatgtcttgcataacagacttgatcaaagatcagtacggc
aactacgtcatccagcatgttgtggaacacgggactcgagaagagcgttccatcatcatg
aatctcgtgcgtggggaggtctgtgatctttcccaacacaaatttgcctctaacgtcgtt
gaacgttgcctccagcatggatcattggacgaacgtcagattctgattgaaattcttatc
atgggggaaggagacccaaactcttcccctctcaaccatcttgttcgagatcagttcggg
aactatgtggttcagcgcgtattagacgtcgccaggcccccccaaagagaaagagtggtg
actattttgcgggctcaagtgcccgctatcaaaaaatactcttacggcaagcatatcatc
gctcgcctagaggagcatcagagtaactctggatcgactagttatcatcacggtcagggt
cactcgcacaatggagcaagccacggaagcctgcatcgggaacgtcatgtgagcccagcg
atgatgccggcaggggtttcacacggtttgccctctggccctaatgattacatctactac
gggtag

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