Chondrus crispus (carragheen): CHC_T00002788001
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Entry
CHC_T00002788001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CHC_T00002788001
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccp01009
]
CHC_T00002788001
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccp03019
]
CHC_T00002788001
03036 Chromosome and associated proteins [BR:
ccp03036
]
CHC_T00002788001
Protein phosphatases and associated proteins [BR:
ccp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
CHC_T00002788001
Messenger RNA biogenesis [BR:
ccp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
CHC_T00002788001
Chromosome and associated proteins [BR:
ccp03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
CHC_T00002788001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
PDS5
CLASP_N
HEAT_EZ
Cnd1
Adaptin_N
XMAP215_CLASP_TOG
Htt_N-HEAT_1
Ecm29
Motif
Other DBs
NCBI-GeneID:
17321638
NCBI-ProteinID:
XP_005713923
UniProt:
R7Q7U9
LinkDB
All DBs
AA seq
714 aa
AA seq
DB search
MKDIVAPYALLRHPVSLSTLDVPAPSLCTLSALSRFPCVPSHLSRSHFLPLPFPHLPALR
NPVRLSLCLHSPFPHLQQLVTSSEVRIPPSPLGPHPRLQPFAMTSISQDEDLDAALYPIA
VLLDELKNEDLELRLNATRRIKTIAEALGPERTRGELLPFLADSIDDEDEILLALATEFG
DFIEEVGGSPHAYVLVEPLETLATVEETLVREKAVESLHALSATIADLSDTDSRTLHVDH
MFPLLQRLASGDWFTSRVSACSLLPDIYRRIPADEVNARTEVLNLFKSLAEDETPMVRRT
AAVEIGRVAQSLNNLDPTSIRNALVPVFADLVEDDQDSVRIVAVQNAATFAGVVMKQKTG
DGANRVIELVLGFTTDKSWRVRYVAADELNALCDALGSEPTKKDLLPAFVKLLTDSEPEV
RTAAANKVTAVAQRIIELLPSEIVPVVEEMVSDASQHVRSALASNIMGLAPNLATSEAVN
TLVDVVMALLKDEVPEVRLNVISRLEKVSFIMSSEKLSRELLPAVVDLAEDKNWRVRLAT
MHHIPLLASQLGRDFFEENAKLGDLCISWLGDCVYSVREAAIANLKAVTEVFGIGWAKDH
IVPQVLGMYDMSNNYLLRVTSLHAIGVLAEVVGSETVEELFLPIITERAYRDPVPNVRFC
SAKTLNLVIPYVRQDVRESKIRPCLLSLVDVNEKDKDVNYFAQQALQKLGTCPS
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacattgtcgccccttacgccctcctgcgccatccggtttccctttccaccctc
gacgtccccgcgccctccctctgtaccctatctgccctctcccgtttcccttgcgttccc
tcccacctctcgcgatcccacttcctcccccttccattcccgcacctccctgccctacgc
aatcctgtccgcctttcactctgcctccactcgccgttccctcacctgcaacagctcgtt
acctcgtctgaagtccgcatcccaccctcgccgttgggacctcacccccggctccaaccc
ttcgccatgacctcaatctcccaagacgaagacctggatgccgctctctatccgatcgcc
gtcctcctcgacgaactcaagaacgaagatcttgagctgcgtctgaacgccacccgtcgc
atcaaaaccatcgccgaagccctcggccccgagcgcacccgcggcgagcttctccccttc
ctcgctgacagcatcgatgacgaggacgaaatccttcttgccctagccaccgagttcggc
gacttcattgaggaagttggcggctcaccgcatgcgtacgtcctcgtcgaacccctcgag
accctcgccactgtcgaggaaactctcgtccgagagaaggccgtcgagagtttgcacgct
ctatctgccaccatcgcagacctttccgataccgatagccgtaccctccacgtcgaccac
atgtttcctttgctacagagactcgcctccggcgactggttcacctcaagagtctccgcc
tgctcgcttctcccggatatatacaggcgcattccggctgacgaggtcaacgcccgtaca
gaggtcctcaatctcttcaaatccctcgcggaggacgagacgcccatggttcgtcggact
gccgccgtcgagattggaagggttgcccagtcgctcaacaatttggaccctacctccatc
cgtaacgcattagtgcccgtatttgccgatctcgtcgaagatgatcaagatagtgtccgt
atcgttgccgtgcaaaacgccgcaacgtttgcgggtgtcgttatgaagcagaagactggc
gacggagcaaatcgcgttattgaactggtacttggatttactacggacaagtcttggcgg
gttcgttacgttgcggctgatgaattgaacgccttatgtgatgctctaggttcagaaccc
actaagaaagacctcctccctgcgtttgttaagcttctgacggatagcgaaccagaagtt
cgaactgccgcggcgaacaaggttactgccgttgcacaaaggatcatagagctccttccg
tctgaaatcgtaccggttgtcgaggaaatggtctctgatgcatcgcaacacgtacgttcc
gcgctggcctctaacatcatgggtctcgctcccaaccttgccacgagcgaggccgtgaat
acgcttgtcgatgtggtcatggctcttttgaaagatgaagtgcctgaggtgcgcctcaac
gtgatttctcgcttggagaaagtcagttttatcatgtcgagtgagaagctaagcagggag
ttgttgccggctgttgttgatttggctgaagacaagaactggagagttcgactggccact
atgcaccatatccctttgcttgccagccagcttggtcgcgactttttcgaggaaaatgcc
aagctgggtgacctctgcataagttggctcggtgattgtgtatattctgtccgtgaagct
gctattgcgaatctaaaagcagtcacagaggtgtttgggattggatgggcaaaggatcac
attgttccgcaagtgcttgggatgtacgacatgtctaacaattatctgttgcgcgtcact
tctcttcatgctattggcgttcttgcagaagttgtcggttcagaaactgtggaggaattg
tttcttccaattattactgaaagagcatatcgagatccagtccccaatgtcaggttttgt
tctgccaagactctgaaccttgtcattccatatgttcgccaggatgtccgggagtcaaag
attcgaccatgtttactatcacttgtcgatgtcaacgagaaggacaaggacgttaactat
tttgcccagcaagcgctgcaaaagctcggaacctgcccctcttga
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