Chondrus crispus (carragheen): CHC_T00006026001
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Entry
CHC_T00006026001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CHC_T00006026001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccp02000
]
CHC_T00006026001
04147 Exosome [BR:
ccp04147
]
CHC_T00006026001
04090 CD molecules [BR:
ccp04090
]
CHC_T00006026001
Enzymes [BR:
ccp01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
CHC_T00006026001
Transporters [BR:
ccp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
CHC_T00006026001
Exosome [BR:
ccp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CHC_T00006026001
CD molecules [BR:
ccp04090
]
Proteins
CHC_T00006026001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
Zeta_toxin
AAA_5
RsgA_GTPase
DUF87
Rad17
AAA_29
AAA_16
AAA_30
AAA_15
DUF815
G-alpha
NB-ARC
DUF3185
Motif
Other DBs
NCBI-GeneID:
17325456
NCBI-ProteinID:
XP_005717741
UniProt:
R7QKD7
LinkDB
All DBs
AA seq
1349 aa
AA seq
DB search
MPPLATLSPPRQPGSALYCPADSHPSFLLHPSHSANTTPSRASSMASSMASSPLDGKAAV
ATDDNINSNEPLPTTDSGNRSITSRIKAMIKPEASDNEKDRDNSLPPVPARQLFAYSTPN
ERWLMVIACVAAAAHGTILPLFTIIFGSVIDVFDENTISAEELNTLTSAIGSKAKWFLIL
GAVAFVVSLIQVRFQLVFAQRVGNRLRRLFFDSLMRQDYAWYDQNDGGELTARVASDVSL
IEGGIGDKFSSAVQFMSMFVSGFIIAFVYSWKLTLVILAIAPLLAISGALFGKLAADSTS
ESLGAYGAAGGIANEVLNLIRTVTAFNGQETEAKRYEVHLQHAYRAGIMKSAFSGAALGF
TYFVIFATFAVAFSFGAGQVRNESVKAGDVIVTFFSVFVATISIGQAAPAFNAFAIARGA
APRVYEVIRRQSMIDPLNEDEGRILPNVRGDIEFRGVNFNYPTRNHDEMEDNSARPNVLS
DFDLTVKAGRSQALVGSSGCGKSTTVRLIERFYDVNEGQIFLDGVDLRDLNVRWLRSQIG
YVGQMPTLFMLSIRENIALGAAMEVVDADKSGRTVLKRSTVTEEAIVKAAKMANAHDFIM
KLPERYDTLLGERGALLSGGQKQRICIARALVRNPKILLLDESTSALDARSERIVQDALE
AASEGRTTITIAHRLSTVKNADRISVIDEGLVAESGTHDELIRVEGGAYRRLVEYQNVEA
KNRGLSSEAAEIGEGTGATKAQTESISKTAHLHAAAEEEELSATDKGVLKRAFAMNIKEL
PFIILGMIGGALAGASFPALAITFASVIDVLSAKDNEAEVRKWSLLFVLLGGIAFIGYFT
QLAMLGISGERLTRKLRGLAFRSLLKQDMGFFDKKENSVGQLTSRLATEATLVKGITGDT
LGATAVVCGTLLTGFLVAFLSCWRVALVVTVVFPFMAISEAANVKMISGFDADSNKKFAQ
AGAVASEAVDNYDTVTAIGAQDVFIDRYNDELKGPLRTGQRTALSSGVAFGVAEFLSQAL
WAISFWVGSIFVQNGNCEFVGLMKAVSGLLFAGSALGQAAMFMPDYGKSKVAATNIFRLL
DRKSEIDPTSEEGNSREIVGRVAADKLEFEYPSRTDVPVLRGLSLEVEDGQTLALVGESG
CGKSTIVSLIERMYDARNGTLLIDEVDIKEYEVKGLRQQMGIVSQEPDLFNRTVRDNIAY
GLSHTDGTPVTDSMIEAAAKVANAHDFITELSQGYDTMVGVRGSKLSGGQRQRVAIARSL
VREPKILLLDEATSALDAVSERAVQQALEEAGKGRTTIAIAHRLSTIQDADVIAVVKRGK
IVERGTHEELLEKGEVYAKLIKNQLSAVE
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgcttgcgacgctgtcaccacctcgtcaacccgggtccgctttatattgcccg
gcggatagccatccatcctttctactgcacccctcgcattcagctaacaccacaccatcc
cgtgcgtcctcaatggcgtcctcaatggcgtcctcaccccttgacgggaaagccgccgtc
gccacagacgataatatcaactccaatgaaccccttccaacgacagacagtggcaacagg
tccatcacatctcgtatcaaggccatgatcaagcccgaagcctcggacaatgagaaagac
cgagacaattctctaccccccgtacccgctcgccagctcttcgcgtattccacccccaac
gagcgctggctcatggtcatcgcctgcgttgctgctgccgctcatggaaccattctccct
ctcttcacaatcatatttggcagtgtcatcgacgttttcgatgaaaacactataagtgcc
gaagagctcaacactctcacgagcgcaattggtagcaaggccaagtggtttctcattctg
ggagctgtcgccttcgtagtcagcctcattcaagtaaggtttcagctcgtcttcgcccag
cgcgttgggaatcgacttcgacgtctatttttcgactcactcatgagacaggattatgct
tggtatgaccaaaacgacggcggcgagctcactgcacgcgtcgcaagtgatgtcagtctc
attgaaggtggtattggcgataagttttcctcagctgttcaattcatgtccatgttcgta
tcgggtttcatcatcgctttcgtgtatagttggaagctcacgttggttatccttgccatt
gccccgttgctcgctatcagtggtgccttatttggaaagcttgccgctgatagtacgagc
gagagtcttggcgcctatggtgctgctggtggtattgcaaatgaggtcctcaaccttatc
cgaactgttacggcgttcaatggacaagaaacggaggccaagcgctacgaagttcacttg
cagcatgcgtatcgagcaggaattatgaagagtgctttcagcggtgccgccctcggcttc
acctacttcgttatatttgctaccttcgcagttgcattttcattcggagcaggacaagtc
cgaaatgaatctgtgaaggccggtgatgtcatcgtcacctttttcagtgtcttcgttgcc
actatttcaatcggacaagctgctcccgcttttaatgcgtttgctattgctcgcggtgct
gcaccacgtgtctatgaagtcattcgtcgccagagcatgatcgaccctttgaatgaagat
gaaggtcgaatcctcccgaacgttagaggtgatattgagtttcgaggggtcaatttcaat
tacccaacacgaaaccacgacgaaatggaggacaacagtgcacgaccgaatgtgctttct
gactttgacttgacggtcaaggctggcaggagccaggctctcgtcggaagcagtggctgt
ggaaagagcacaaccgtgcgcctcatcgaacgattctacgatgttaatgaaggccaaatt
ttcttggatggggttgacttgcgcgacttgaacgtccgctggcttcgcagtcagatcgga
tacgttggccaaatgcctactctcttcatgctttccattcgtgagaatattgctcttggc
gctgccatggaagttgtggatgcggacaagtctggcaggacagtgctcaagagatcgacg
gtcaccgaggaagcaattgtgaaggccgccaagatggcaaacgcgcatgattttattatg
aaactaccggagcggtacgatacgctgcttggagaacgtggtgctttgttgagtggcggg
cagaagcagagaatttgcattgctcgggcccttgtgcggaaccccaaaattctgctgctt
gacgaatctacaagcgcactagatgctcggtctgaacgcattgtgcaagatgccctggaa
gctgcgtctgagggtcgaacgacgattaccatcgctcatcgtctgagcactgtgaagaac
gccgacaggatttccgttatcgatgaaggattggtcgcagaaagcggcacccatgacgag
ctcattcgtgtcgaaggtggtgcatacaggcgtcttgtcgagtaccaaaatgtcgaggcg
aagaatagaggtctatcttcagaagcagctgagatcggggaaggcacaggtgccacaaag
gcgcagactgagtctatttccaagactgctcatcttcacgcggcggccgaagaagaagag
ttgtctgcaaccgacaagggtgttctgaaacgagcgttcgctatgaatatcaaggagcta
ccgtttataatcttgggcatgattggtggtgctctggctggagcatcctttccagctttg
gccattacctttgcaagtgttatcgatgtcctatctgcaaaagataatgaagcagaagtc
cgaaaatggtctctcctcttcgttctcctcggaggaattgcatttattggatatttcacg
cagctggcaatgttaggcatctctggtgagcgtcttacgcgcaagcttcgtgggttggcg
tttagatcgctgttaaagcaagacatgggctttttcgacaagaaggagaattcagtcggt
caactgacgagccgcctggcaacggaagccactctcgttaaagggatcactggtgatacg
ttgggcgcaacggccgtggtgtgcgggactctgttgactgggtttctcgtcgcgttttta
tcctgctggcgagttgcgctggttgtaacggttgttttcccgttcatggcaatctctgag
gctgcaaacgtgaagatgatctctgggtttgacgccgattccaacaagaagtttgcccaa
gctggggctgtggcgtcggaggcagttgataactatgacaccgttaccgcgattggcgct
caagacgtgttcatcgacaggtacaatgacgagctgaaggggccacttcgaactggacaa
aggacggcgctttcgtctggagtcgcgtttggtgttgcagagtttctgtctcaagctcta
tgggcgatatccttttgggtagggtccattttcgtacagaatggaaactgtgaattcgtc
gggttgatgaaggcggtgagtggacttttatttgcgggctcggccttgggccaggctgcg
atgtttatgccagactacgggaagtccaaggtcgcggcaacaaacatttttcgtttgtta
gacagaaagtccgagatcgacccaacaagcgaagaagggaacagccgtgagatcgtggga
agagtggcggctgataaactcgaattcgagtatccgagtcgaacggacgtgcctgtgcta
cgaggattgtcgctggaggtggaagacgggcaaactttggcactggttggcgaaagcggg
tgcggaaagtcgactatcgtatcactgatcgaacggatgtacgatgcgcgaaacgggaca
ctcctgattgatgaggtggacatcaaggagtacgaagtcaagggcctacggcagcaaatg
gggatcgtgtcccaggagccggacctgttcaaccggactgtgcgtgacaatatcgcatac
ggtctaagccacacggacggaacgcctgtaacggactctatgattgaagcagcagccaaa
gtagccaacgcacatgactttatcacggagctgtcacaaggatacgacacgatggttggg
gtccgcgggagcaagctgtccggtgggcagcgacagcgtgtggcgattgcgcgtagttta
gtgcgggagccgaagatcttgctgctggacgaggcgacgagcgcgctggacgcagtgtcc
gagcgggctgtgcagcaagcgctggaggaggccgggaagggcaggacgactattgcgatc
gcgcatcggttatcgacgatccaggacgctgacgtgattgcagtggtgaagaggggaaag
attgtggaacgtgggacacatgaagagttgttagagaagggcgaggtttatgctaagttg
attaagaatcagttgtcggcagtcgaatga
DBGET
integrated database retrieval system
