Chondrus crispus (carragheen): CHC_T00006152001
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Entry
CHC_T00006152001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K10080
lectin, mannose-binding 1
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CHC_T00006152001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccp04131
]
CHC_T00006152001
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ccp04091
]
CHC_T00006152001
Membrane trafficking [BR:
ccp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
CHC_T00006152001
Lectins [BR:
ccp04091
]
L-type lectins
CHC_T00006152001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lectin_leg-like
Bact_lectin
DUF4201
Roughex
Laminin_II
Motif
Other DBs
NCBI-GeneID:
17326026
NCBI-ProteinID:
XP_005718310
UniProt:
R7QIS9
LinkDB
All DBs
AA seq
497 aa
AA seq
DB search
MSSPRVSVLLALTALLLLFPRSSLCYPTLDERKRRHPQIFQFPYMGRGDPDHSFRHPYKP
SAGGDPVDAWFQLGSTVIARARSGRDIVRLTSAAQANQGIFYNAVRTESANFNGYFDVQI
DSVRESHEAADGMGFFFVKDRPKAGSAMGIDERVQGLGLIIDTFSNSRSRRVPYMYAYVS
DGTKKWNPDTDGSDTELARGCQLEMNTQIRVYVQFVDGDLHVGVAMNPRSPHRWHTCFKA
SNVKMPFSGGGVLAFAGETGHFFALHEVHDASFIDESDHSGEGYRSEYQSQQYGDPQQQQ
QRQRQSPHQQQQQKEAPRAPVSNDPSTRVHKSDNPTESLAGSLDLQIYHVFDSMTQDLKN
VGGKDAAQTTSKLTDVRDVTVHLVTELEKQSSNMKELAGTLSHLKESAGDLTYASDRFTS
QLRGMHASLKVLRDKTEKMGDKHDDLHADLLDHQESIAERQGNGVLIMFLVMQVLLVAVV
YFLNKITATSRKMGRMV
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgccacgcgtttcagtgctcctcgccctcaccgcgcttctccttcttttccct
cgctcctccctctgctatcccaccctcgatgagcgcaagcgaagacatcctcaaatcttc
cagttcccgtacatgggccgtggcgaccctgaccactccttccgacacccctacaagccc
tccgcaggcggcgatcccgtcgatgcctggttccagctgggctctactgtaattgcccgc
gcccgttccggccgcgacattgtccgtctcacgtcggccgcacaagcaaatcagggcatc
ttctacaatgccgtcaggacagagtcggcaaacttcaacggctactttgacgtacagatc
gacagcgtccgcgagagccacgaggctgcggatggcatgggctttttctttgtcaaggat
cgcccaaaggcaggctccgccatgggtattgatgaacgtgtccaaggcttggggcttatt
attgacactttttcgaatagcaggagtaggcgtgtcccgtatatgtacgcctatgtgtct
gatggcaccaagaagtggaacccggataccgatggatctgataccgagttggcgcgcggc
tgtcagctcgagatgaatacccagattcgcgtttatgtacagtttgttgatggtgatctt
catgtcggagtggccatgaacccgcgcagcccgcatcgctggcatacgtgctttaaagcc
tccaatgtcaaaatgcccttctcaggaggtggagttcttgcctttgcaggcgagacgggc
cacttcttcgctcttcatgaggtgcatgatgccagttttatagatgagagcgatcattcg
ggagagggctaccgctcagagtatcagtcgcagcagtatggcgatccgcagcagcagcaa
cagcggcagcggcaatcgccacatcagcaacaacaacagaaggaggctccgcgtgctccg
gtatccaacgacccgagcacgagagttcataagtctgacaatcctacagagtctttagca
gggagccttgatttacaaatctaccacgtgttcgactcaatgacacaagatctaaaaaac
gtaggagggaaggacgccgcgcagacgacgtccaagctgacagatgttcgcgacgtgact
gtgcatctagtgacggaactggagaagcagagttcaaacatgaaagaattagctgggacg
ttgtcgcacttaaaagaatctgcgggggacttgacgtatgcatcagatcgatttacgtcg
caattgcgaggtatgcatgcgagtctcaaagttctacgtgacaaaacggagaagatgggc
gacaagcatgatgatttgcatgctgatttgttggatcaccaagaatctatcgcggaacgt
caagggaacggagtgttgataatgtttttagtgatgcaagtgctcctggtggctgtagta
tattttctgaacaagattactgcaacatcgaggaaaatgggaaggatggtgtaa
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