Chondrus crispus (carragheen): CHC_T00010279001 Help Entry CHC_T00010279001  CDS       T02916                                  Name (RefSeq) THO complex subunit 1, putative   KO K12878   THO complex subunit 1 Organism ccp  Chondrus crispus (carragheen) Pathway ccp03013   Nucleocytoplasmic transport ccp03040   Spliceosome Brite KEGG Orthology (KO) [BR:ccp00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     CHC_T00010279001   09122 Translation    03013 Nucleocytoplasmic transport     CHC_T00010279001  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ccp03019]     CHC_T00010279001    03041 Spliceosome [BR:ccp03041]     CHC_T00010279001 Messenger RNA biogenesis [BR:ccp03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      CHC_T00010279001 Spliceosome [BR:ccp03041]  Complex C   Other components    EJC/TREX     CHC_T00010279001  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     CHC_T00010279001 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  efThoc1 Peptidase_M91 Motif Other DBs NCBI-GeneID:  17325042 NCBI-ProteinID:  XP_005717330 UniProt:  S0F2Z6 LinkDB All DBs AA seq 657 aa AA seqDB search MNAMHGALISLLVAPKSNPESVATQLHEQSQEYSPNGRGLLERVLKRATVDILKGGIQEP SDPKSAFSNALAIVDCAVVLMRNGHVEERLPWTLLEFVFSSCTRGQLSSGIGAIRERFDS YRRAATTAITHVYVIKAAMSCINRDQHGSDPLLSGRLRLILAAALPVWHPSGLNRRGHVY DGGKIDLGSEMENTKESDFDAALYKAFWGVQEFMQNPSLAENEDVWNTARVAIERILDTF ETISTLRNPSVAPESPSPKYMAAPSLLHLQLVDVRARRHVLIQLVIFLHYLEVIGQTAPS EKTTPSAYKKHGFCKSLFESDGKGTIIKGRVYALLDRDCPGKFKRFVVSLLQRERKWIDW KKRTGYKHLNAPRSEAPKEFKRRRVLSPVPDSLAPDQSKRRPDGPEEWELRQAAWTVLPK SERIDPLRDPTRLKVSSIQDLKTQLQEDMEDPDITDDLKRIKNPKFVWRSLRLLCEESIS TLLQITEPLSEHGVNLERCLAAKDVPAADEETKEAQEVKPDAESKIVVDTKIEAGAKAME GVEAMGETESATKEAAKPEKAVEGLVASKAHADMQAKPKDGALVDSKRNTVGEDKQAENA PEEEADAVGLDKADGDAKVDRKAEGTKETDMVRQNQTVMNAQTSEPAKAIEEVESKP NT seq 1974 nt NT seq  +upstreamnt  +downstreamnt atgaacgccatgcacggcgcactaatctctctcttggtagctcccaaatcgaaccctgaa tctgttgcgacgcagcttcatgagcagtcacaggaatattcaccaaatgggcgaggcttg ctggagcgagttttgaagagggccacagttgacattctcaagggcggcatccaggaaccc tcagatcccaaatccgccttttccaatgccctcgccatcgtcgattgcgccgtcgtgctc atgcgcaacggtcatgtcgaggagcgactgccctggacgctgttagagtttgtgtttagc tcctgtacgcgcggacaactttcaagcggcatcggcgctattcgggagcggtttgactcg tatcgaagagcagcgacaactgcaattactcatgtttatgtcatcaaagcggcgatgtct tgcataaaccgggatcaacacggctccgatcccctactctcagggcgcttgcggctcatt ctggcggctgcattgccggtttggcacccatcaggtctaaatcggagaggccatgtctat gatggtggcaaaattgacttgggtagtgaaatggagaacacgaaggaatctgattttgac gctgcattgtacaaagccttctggggtgtgcaggagttcatgcagaatccgtccttggca gagaatgaagacgtttggaacactgctcgagtggccattgaaagaattttggatacattc gaaacgattagtaccctacgcaatcccagtgttgctccagaaagcccaagtcctaagtat atggcggccccatcccttttacatcttcaactggttgatgtgcgtgcaagacgacatgtt ctcattcaacttgtaatatttcttcattacctggaggttatcggacagacagccccgtca gaaaaaaccacgccttcagcatacaagaagcatggtttttgtaaatctttatttgaaagc gacggtaaaggcacaattattaagggaagagtgtacgcccttctcgatcgtgactgtccc ggcaaatttaaacgttttgttgtgtcgcttcttcaacgagaacgaaaatggattgattgg aaaaagcgcacgggatacaaacatttaaacgcgccacgaagcgaagcaccgaaagagttt aaaagaagaagggttctttctccagttccagactccttagctccggaccagtcgaagcgc cggcctgacggccccgaagaatgggagttgaggcaagcggcgtggacggtcctaccgaaa tccgagcggattgacccgctgcgggatcctactaggctgaaggtttcatctatacaagac ttgaaaacccaactacaagaagatatggaagatccagatatcacagacgatttgaaacgc atcaagaatccgaagtttgtgtggcgttccctgcggttgttgtgtgaagaatccatatcg acattattgcaaataacagagccactatcggagcatggcgtcaatctcgagcggtgtctt gcagcgaaggatgtaccagcggcggatgaggaaacgaaagaggctcaggaagtgaagccg gatgcggaatctaaaatagttgtagatacgaaaatagaggcaggggctaaggcgatggaa ggagtcgaagctatgggggaaaccgaaagcgctaccaaagaggctgccaaacctgaaaag gctgtagaaggcttggtggcgagcaaagcacatgcggatatgcaggctaagccaaaggat ggagccctggtggacagcaaaagaaacacggttggcgaggataaacaggctgaaaatgct ccggaagaagaagcggacgcagtagggctggataaagccgatggagatgcgaaagtggac agaaaggctgaaggtaccaaagaaactgacatggttcgacagaatcaaacagttatgaac gcccagacgagcgaacccgcaaaagcgattgaagaggtcgaatctaagccttag

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