Colias croceus (clouded yellow): 123696408
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Entry
123696408 CDS
T08651
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
ccrc
Colias croceus (clouded yellow)
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccrc03009
]
123696408
Enzymes [BR:
ccrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123696408
Ribosome biogenesis [BR:
ccrc03009
]
Eukaryotic type
90S particles
Helicases
123696408
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
123696408
NCBI-ProteinID:
XP_045498517
EnsemblRapid:
ENSCEUG00000013671
LinkDB
All DBs
Position
12:10474838..10485228
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AA seq
628 aa
AA seq
DB search
MDAYDIFKKLTKGLTFKRRVLGVNNHEQNVKPMLKKAELKKEEPAEVSDIEDEENEDVCG
ENSDDASDVESPDEQNVDTESNDELQIVEGLSVGKKDKKKKEKKSKLTPEELQKKLELEE
QNRFRNEYGIKAVGRHIPSALRDFSELTSRYNVSPELVDTIRQCGYSEPTPIQRQAMPCM
LENRQLIGTAPTGSGKTAAFLIPLLHILGAPAGGPRALILCPTRELAQQIYREALRLSAS
TELRCSVVKSIKLSKVKEREATVRKSDIVISTPNRLCYMLAQENCSVTLDKVQWLIIDEA
DKMFEGSIDEVATFRQQLGTVLGACSSARVGMFSATHTPAVAKWARRTVRGLVSVAVGAR
NAAATTVDQELLFCGNENGKLVAFRQLVQKGLKPPVLVFVQSKDRAKQLFKELIYDGINV
DVIHADRTQAQRDNVVRSFRVGRIWVLICTELMGRGIDFRGVNLVINYDFPPSAISYIHR
VGRAGRAGQKGKAITFFTQDDVVNLRSIASVMKQSGCEVPEYMLRLKQDPNKRKKLAKKA
PHRDKISTILEKPSKRKLEETDKSKTKDTDAVKNSKNKKLRKVSSNEEKVKTKKFGKGKI
DKKNKGENFKEKTGKSNFKKKKNMKPMK
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggatgcatatgatatatttaagaaacttactaaagggttaacatttaaacgacgtgta
ttgggtgtaaataatcatgaacaaaatgtcaagccgatgctcaaaaaggcagaattaaaa
aaagaagaaccagctgaggtcagtgacatagaagatgaagaaaacgaggatgtatgtggt
gaaaattcagatgacgcaagtgatgtagaatcaccagacgaacaaaatgtggacacagaa
tcaaatgacgaactgcaaattgttgaaggattgtctgttgggaaaaaggataagaagaag
aaagagaagaagtctaaactcacaccggaagaattgcaaaagaagctcgagttggaagaa
caaaacagattccgcaacgaatacggcatcaaagcagtcgggcgtcacatacccagcgca
ctgcgggacttctccgagctgacgtcgcgatacaatgtgtccccagagctagtggacacg
atcaggcagtgcgggtatagcgaacccaccccgatacaacgacaggctatgccttgtatg
ttggagaatcgtcaactcataggcacagcgcccacaggctcagggaaaacagccgcattc
cttatacccctattgcacattctcggggctccagccggaggccccagggccctgatcctg
tgccccacgcgggaactagcacagcagatatacagagaggccctacggctgtccgctagt
acggaattgaggtgtagcgtagttaagagtatcaaactgagcaaggttaaagagagagag
gctacggttaggaagagtgatatagtgataagcactcctaaccgtctctgctacatgcta
gctcaagagaactgcagtgtcactttagataaagtgcaatggctgatcatagacgaggcg
gacaaaatgttcgaagggtccattgatgaagtggccacgttcagacagcagctgggcaca
gtgctgggcgcgtgcagttccgcgcgtgtgggcatgttcagcgcgacgcacacgcccgcc
gtggccaagtgggcgaggaggaccgtgcgcgggcttgtgagcgtggccgtgggcgctagg
aacgcagcagcaacaacagtagaccaagagttgttgttttgcggtaatgaaaatgggaag
ctagtggcattcagacagcttgtacagaaaggactcaaaccgccagtactcgttttcgta
caaagcaaagacagagccaagcagctgtttaaagaacttatttatgatggaattaatgtt
gatgttattcatgcagatagaactcaggcgcagcgtgacaacgtggtacgcagtttccgc
gtgggtcgtatctgggtgctaatttgtacggaactcatgggtcgtgggatcgatttccgt
ggggtcaatctggtgatcaattatgattttccaccttcagctatatcttatattcacaga
gtgggtcgagcgggccgagcggggcaaaagggcaaagctatcacgttctttacgcaagac
gatgtagttaatttaagaagtatagcatcagttatgaaacaatccggttgtgaggttccc
gaatacatgttgcgtttaaaacaagacccaaataaaaggaaaaagctcgccaagaaagcg
cctcatagagataaaatatctactatattggaaaaacctagcaaacgaaaacttgaagaa
acagataaatcaaaaacaaaagatacagatgcagtgaaaaatagtaaaaataagaaatta
aggaaagtttccagtaatgaagaaaaagtcaagacaaagaagtttggaaaaggcaaaata
gataagaaaaataaaggcgagaatttcaaagaaaagacaggcaagagtaattttaagaaa
aagaagaatatgaaacctatgaaataa
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