Colias croceus (clouded yellow): 123697447
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Entry
123697447 CDS
T08651
Name
(RefSeq) agrin-like isoform X1
KO
K06254
agrin
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc04512
ECM-receptor interaction
ccrc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123697447
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123697447
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ccrc00535
]
123697447
Proteoglycans [BR:
ccrc00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
123697447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kazal_2
Laminin_G_1
Laminin_G_2
Kazal_1
CFAI_KAZAL
Laminin_EGF
EGF
Laminin_G_3
EB
hEGF
EGF_2
Motif
Other DBs
NCBI-GeneID:
123697447
NCBI-ProteinID:
XP_045499925
EnsemblRapid:
ENSCEUG00000005222
LinkDB
All DBs
Position
1:complement(6571454..6697461)
Genome browser
AA seq
2040 aa
AA seq
DB search
MNRPGYDYTAPVSTTYYATNSRPPQYDRGYNQLAPVPVYSPSSHPLSNYADVYEGNNDTT
LRAEERHWYIENHKNIQPTYSPNNEIVPQEIKVKKEEEKKSDAQIIRSEATQARRRKENR
CSCECWPSSDNNEVQNGGNAATTRSLSGVDMVASYGVYGTSQDDDSSGFGRLSEKNAVYG
QTSNAPVQGVIVNQQGNSAVVRSASTTNSACGKCCVWSSNVQVANSEDYCWIHYCRPALI
VLLLLFFLVLLGVSTGFLLTNNYLHYQPRPPAPEEACEKTFCRWGAECVSLGDGRAHCAC
PTSCPSTAAPVCSTAGRTYRNHCFLRKEACERRLNLRVKHEGECEAGEPCSSVTCQNGAR
CVVTYGQAECRCPRNCQRRKAVCGTDGKEYPSACHLDKHACENQLNITVKYHGKCDPCLE
HECADGSVCQLNEVRAAVCRCGPPCDLIVRPGSAVCGSDYKDYISECALRLEACRTRQQL
SIAYRGECASAQHPCESVKCGVRELCTLDVHGVAVCGCGPDCEEVMRPVCGTDGRTYDNP
CLLDRAACLENRDIRVAYMGACGIENPCALATCPWGGACIARGGSAQCSCPVCDSSLAPV
CASDHNTYGSECKMRMHACQAGMGEHDLKVLYNGTCLTCADIVCQGGGSCEVGDSGRPVC
RCNHNCTEAQESDVVCGTDGQTYPSQCELDSTACHDQSALRLAYNGGCALCEGVQCSFGA
HCIAGECVCPTDCTGAPHEPVCGSTMQTYSNECELQKAACGVPPPTKLHVIFYGDCKDRL
AVVPPIAMTTTAMTTTEAEQDSTDSLGATELGGTTSSTACRDIRCDFDASCEIGLDGYPR
CSCLFECPTEDEYFPVCASDFRLYPSLCAMRKEGCQKQLELRLRPLDLCKGMEVRPCGNN
KAMVDLSTGLEIDCGNGPHRQDCPAGSYCHITLTAARCCPKNDVKQGEDKKNLHCSESSF
GCCSDGTTAASGSNEEGCPVSSSCGCNRLGSVTDRCDDSGQCACRPGVGGLKCDRCEPGY
WGLPRIGSGHTGCIPCGCSAFGSVREDCEQMTGRCVCRPGVQGQKCTVCADHRRRLGPNG
CSDPESLSVAESCSELSCYFGAVCTERTGGALCECAAAPCPDSDLNMLVCGSDGKTYESE
CHLKLQACRTQEDIVVQAFGPCKLSEIPGTAGPPRPSSPIQFTQQDDGAASKSTRHLLNP
YNKYDWTRKETPSDFDSILSGQRTKGSQTATTATVGAVGALLGDLCTQDSDCTALPGAHC
ARGGCVCRPGYIPTTHRKACIEQSTQETTEEYSACLSEPCTNQGTCIDLPGSTYACVCSD
HYTGINCETIVKDESNIPYIETPSFDGSSYIRLKPLKAYHKLNIDIEFKAFSENGVILYN
QQKSDGTGDFVSLALVNGYLEFRYNLGNGAIVLTSLEKISLNEYHKVSAKRYHRDGILSV
DNFEDVAGQSRGNLKALDLADDAFIGSVPTNYSRVFDNIGTRSSFIGCIKYLRIIRHLVT
KKLGRPDSLVVSIENVRECQSNPCMSMPCKNGATCRPVEDSTTDYACSCSIGFQGSNCDD
RLDPCESNPCGYDEGLLCDIGPDGGHVCRCLFGGEIGSNGNTCNNDVNVVQESWSPQFNG
TSYIELMPLEGLGKAFRIEIWFLTNRFSGMLLYTGQSNKAKGDFIAINLVNGYLQFRYNL
GSGIANITSPTPITKGRWHRVRVSRAGRHGSLQLDHHPVQRGHSAPPLTHLELTLPLFIG
SLPSYIRPHKMSGVTSSFIGAIQQVFVNGNPLSLYSLDTAKCSVVPDEERLPCATSGVTK
YTGPPCGDGLTPCKNNGTCIPLLNEYKCMCRDGYEGRNCEVQLQVEMLNDEAPIRFDGNN
YYSYRSRGGRRNHGPRGIRYEIKFRTSNDSGLLLWRRKIGIRPRDFIGLGLSFGKLQLIY
TDTDVKEVNSAVHEDWFQSIESKERVDDGMWHTATVRRRKRLAMLQVDDTPPVRGYSQSL
LVPSKANPKLWIGGSQSLPLGLPATLYTGFRGCVASVKSNGRHIDITSPIRPISTIQYCT
NT seq
6123 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggccgggctacgactacaccgcgcctgtatccaccacatactatgcgacgaat
agtcgaccgccccagtacgaccgcggttacaatcagctcgctccagtccccgtctacagc
ccgtcatcacatcctctttcaaattatgcagatgtctacgaaggcaataacgataccacc
ctcagagctgaggaaagacattggtacatagaaaatcacaaaaatattcaaccgacttac
tcccccaacaatgagatcgtgccacaggagattaaggttaaaaaggaagaggaaaagaaa
agcgacgcacaaattataagatcagaagcgactcaagcacgcagaagaaaagaaaatcga
tgttcgtgcgagtgctggcctagttctgacaataatgaggtacaaaacggtggcaacgca
gctactacgcgatctttatcgggcgtcgatatggttgcatcatacggcgtttatggcact
tctcaggatgatgacagttcaggtttcgggcggctgtctgaaaagaacgcggtgtacggc
cagacgagcaatgctccggtgcagggtgtgatagtgaatcaacaaggaaacagtgctgtt
gtgagatcagcgagtacgacaaactcggcttgtggaaagtgttgtgtgtggtcgtcgaac
gttcaagttgcgaactcggaggactattgctggatacattactgtagaccagcacttatt
gtgttgctgctgttattttttctagttctgttgggagtttctacagggtttctattaaca
aataattatttacattatcagccacggccgccggctcctgaagaggcctgcgagaaaacg
ttttgccggtggggcgcggaatgcgtgtcgctcggcgacgggcgggcacattgcgcttgc
cctaccagctgtccctcgacagcggctcccgtgtgttcgacggctggccgaacttaccgc
aaccattgcttcctgcgtaaggaagcgtgcgagcgaaggttgaacctacgcgtcaagcat
gagggtgaatgtgaagccggcgagccgtgcagctctgtcacctgtcagaacggagcccgc
tgtgtggtcacctacgggcaggcggagtgccgctgcccccgcaactgccagaggcggaaa
gccgtgtgcggcaccgacggcaaggagtacccctccgcgtgtcatctcgataagcacgct
tgcgagaaccagctcaatattaccgtgaaatatcacgggaaatgcgatccatgtttggaa
cacgaatgcgcggacggcagcgtctgtcaactgaacgaagttcgagctgccgtgtgtcgt
tgtggacctccctgtgacctcattgttcggcctggttctgctgtgtgtggatccgactac
aaggattatatcagcgaatgtgcgctacggctggaagcgtgtcgaacgagacaacaactg
tctatagcgtatagaggagaatgtgcttcagcacaacatccctgcgaatcggtgaagtgt
ggtgtgcgtgagctctgcacgttggatgtacacggcgtggccgtgtgtgggtgcggacca
gactgcgaggaggtgatgaggccagtctgcgggaccgacggccggacctatgataacccg
tgtctgcttgaccgagccgcttgtctggagaacagggacatacgtgttgcgtatatgggc
gcttgcggtatcgaaaatccctgcgcactagcaacatgtccctggggcggcgcgtgcatc
gcccgcggcgggtccgcgcaatgttcctgccctgtgtgcgactctagcctcgcgcccgtg
tgtgcgtcagaccacaacacgtatggaagcgagtgcaagatgcgcatgcatgcttgtcaa
gccggcatgggggaacacgacctgaaagtgctgtataatggaacgtgcttaacatgtgcg
gacatcgtgtgccaaggaggggggagctgcgaggtgggcgattccggacggcctgtatgc
cgatgtaaccacaactgtacggaggctcaggaatcggatgttgtatgcggaacggacgga
caaacgtacccgtcgcagtgtgagctggactcgacggcgtgtcacgatcagagcgccctg
cggctggcttataacggaggttgcgcgctttgtgagggggttcagtgctcttttggggcg
cattgcatagcaggggagtgtgtttgtccaactgattgcacgggggcccctcacgaaccc
gtatgcgggagcaccatgcagacttattccaatgaatgtgaactgcaaaaagctgcgtgt
ggagtaccaccacctacaaaactgcatgttatcttctatggggattgcaaagatcgactt
gccgtggtaccaccaatagctatgactacgaccgcgatgactacgactgaagctgaacaa
gactcgacggattcactgggagcgacggagctgggtggcacgactagttcgacagcttgc
cgagacatccgttgtgattttgatgccagctgcgagattggtctcgatggctatccgcgt
tgttcctgccttttcgaatgtccgactgaggatgaatattttccggtctgtgcctccgat
tttcggctttatcctagtttgtgtgcaatgcggaaagagggctgccagaaacaattagaa
ctaagattgcgaccgttggatttatgcaaaggtatggaagttcgaccatgcgggaacaac
aaggctatggttgacttgtccacgggtctggaaatagactgcggcaacggacctcaccgg
caggactgtcccgcgggaagctactgtcacatcacgctcactgctgcaaggtgctgtccg
aaaaatgacgtgaagcagggggaagataagaagaacttgcattgttcggagagttcgttc
ggttgttgttctgatggcacgacggcggcgtctggctcgaatgaggaggggtgtccggtt
agctcgagctgcggttgcaataggctggggtcggtgacagatcgctgcgatgatagcggt
cagtgtgcgtgtcggccgggggtgggcggcctcaagtgcgatagatgcgaacccggctac
tggggactgccacggataggctctggacacactggatgtattccatgcggctgttcagcg
tttggttccgttcgagaagattgtgagcaaatgacagggcggtgcgtttgccggcccgga
gtgcagggacagaagtgcactgtgtgcgccgaccacaggcggcgacttggacctaatggc
tgctcggaccctgaaagccttagcgtagcggaatcatgtagcgagttgtcttgttacttc
ggagctgtgtgcacagagaggacgggaggggcgctttgcgagtgtgccgccgcgccctgc
cctgatagcgatctgaatatgctggtatgtggaagtgatgggaaaacgtacgaatcggaa
tgtcatctcaaactacaagcgtgtagaacgcaagaggatatagttgtgcaagcgtttggg
ccgtgcaaattatcagaaataccaggcacagcaggacctccgagaccttcttcaccaata
caattcacacagcaagacgatggcgcagcatcaaaatctacgaggcatcttctaaatcca
tataataaatacgattggacgagaaaagaaacccccagtgactttgacagtatcctatcc
ggacagaggactaaaggttcgcaaacagcaacaactgccacagtaggggcggtgggtgcg
ttgctcggtgatctctgtacacaagactcggattgtaccgcattgccgggcgcacattgc
gcgcggggtggctgcgtgtgccgccccggttacatacccactacgcatcggaaggcttgt
attgaacaatcaacccaagaaacaacggaggagtatagtgcgtgcttatcagaaccctgt
accaatcaaggcacttgtattgacctgcctggttcgacgtacgcctgtgtgtgctctgac
cattacactggtatcaattgcgaaacaatagtcaaagatgaatctaatatcccttacata
gagaccccgtctttcgacggatcatcgtatatacgtctgaaaccattgaaagcttaccat
aagttgaatattgacatcgagtttaaggcattttctgagaacggagttatattgtacaat
cagcagaaatccgacggtacgggggattttgtttcgctcgctctagtgaacggatacttg
gagttcagatacaacctcggaaatggagcgatcgtactaacatcactagaaaagatatct
ttgaatgaatatcataaagtgtcggcaaagagatatcacagggatggaattttatcagtt
gacaattttgaagatgtagcaggtcaatcgagggggaatttgaaagctttggaccttgct
gacgatgcgtttattggcagtgtaccaacgaattattcacgggtatttgataatatcgga
acacgaagcagttttatcggatgtattaaatacttgagaataatacgtcatctagtgaca
aagaaattgggtcgtccggactcattggtagtttctatagaaaacgtccgcgagtgtcaa
tctaatccctgtatgagtatgccttgcaagaacggcgccacgtgccggcccgtcgaggac
tccacgaccgactatgcgtgtagctgctctatcggatttcaaggatccaattgcgacgat
agattagatccgtgcgagtcgaatccttgcgggtatgatgaggggctattgtgtgacatt
ggcccagatggaggacacgtctgccgatgtttattcggaggcgaaattggatccaacggg
aatacttgcaacaatgatgtaaatgttgtccaagaatcgtggtctcctcaattcaatggg
acgagctacatcgagttaatgccgctagaaggactgggcaaagcgttccgcattgaaatt
tggtttttaacgaaccgattttcgggaatgttactctacaccggccaatccaataaagcg
aagggggattttatagctattaacttagttaatggatacctccagtttaggtacaattta
gggagtgggatcgctaatatcacgtcacctacgccgataaccaaaggtcgttggcaccgc
gtgcgtgtgtcgcgcgcgggccggcacggcagcctgcagctcgaccaccaccccgtgcag
aggggacattccgcgccacccctcacacatttggagctgacgctgccactctttattgga
tcgttgccttcgtacattcgtcctcacaaaatgtcgggagtgaccagcagttttataggc
gcaattcaacaggttttcgtgaatggaaatcccttgtcattatatagcttggacacagcc
aagtgcagtgtagtcccagatgaagagagactcccttgtgctacgagcggggtcaccaag
tatactggcccgccttgcggggatggtctcacgccatgcaagaacaacggcacatgcata
cctttattaaacgaatacaaatgtatgtgccgcgacggctacgaggggagaaactgcgag
gtacaattacaagtagagatgttgaacgatgaagcgcctattaggttcgacggaaataat
tactactcgtacagaagccgtggaggacgcaggaatcacggccctcgcggtataagatat
gagattaaattccgtacttccaacgactccggtctcctcttgtggcggcgtaaaatcggc
atacgaccgcgagatttcattggcctcggccttagtttcggcaagcttcagctgatttat
actgatacagatgtcaaggaggttaattcagctgtgcatgaggattggtttcaaagtata
gagtctaaagagagggttgatgatggtatgtggcatactgcgactgtgcggaggaggaag
cggcttgcaatgcttcaagtggatgacacgccgcccgttagagggtactcgcaatctttg
cttgtgccttcgaaagccaatcctaagctgtggataggtggatcacagtcattaccattg
ggactcccagcgactctgtacacaggatttcgtggttgcgtcgctagtgtcaaatccaat
ggaaggcatattgacatcacatcccccatacgacccatatctacaatacaatattgtacc
taa
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