KEGG   Colias croceus (clouded yellow): 123701630
Entry
123701630         CDS       T08651                                 
Name
(RefSeq) DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
ccrc  Colias croceus (clouded yellow)
Pathway
ccrc03030  DNA replication
ccrc03410  Base excision repair
ccrc03420  Nucleotide excision repair
ccrc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ccrc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    123701630
   03410 Base excision repair
    123701630
   03420 Nucleotide excision repair
    123701630
   03430 Mismatch repair
    123701630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccrc03032]
    123701630
   03400 DNA repair and recombination proteins [BR:ccrc03400]
    123701630
Enzymes [BR:ccrc01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     123701630
    6.5.1.6  DNA ligase (ATP or NAD+)
     123701630
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     123701630
DNA replication proteins [BR:ccrc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    123701630
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     123701630
DNA repair and recombination proteins [BR:ccrc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     123701630
   NER (nucleotide excision repair)
    Other NER factors
     123701630
   MMR (mismatch excision repair)
    Other MMR factors
     123701630
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 123701630
NCBI-ProteinID: XP_045505070
EnsemblRapid: ENSCEUG00000013405
LinkDB
Position
22:8614826..8632667
AA seq 906 aa
MNSLKFLTVSRLVFGLRSVPVCAGNVNISHFVNVPNKLVNFGTQNMSQTSIRSFFTATPK
KNIEIKKEDSKDNSITDENESPVTNGTEKKAKRIRSESSGSDSVDDVKSNKVDSAEKKKS
KRRRIVSSGSESETKSDTEEIKLEKSENPVKTYDSPKSKKTKAKVLKVESPVKVSPKKES
VFSTLKSPKVKQEKESPKAKKEVKSPPSSKKKNNVSPSSKKKEVPEENKENGIKEEKLDI
KATLTPEADYNPAKSKYNPINDACWSKGKEIPYLALAKTLEAIEATSARLKMIEILSNYF
RSVIVLTPEDLLPSIYLCLNQLAPAYHSLELGMAETYIMKAVGQCTGRSLAQMRTAARAS
GDLGLVAEQARATQRTMFTPAPLTLRRVFTALKEVAAESGHASVNKKIGKIQSLYVACRF
SEARYLIRSLEGKLRIGLAEQSVLQALAVACAATPPAGPRAGEIDVAGKMSAEQFKARVD
EYALTIKTTYCECPNYDTLVAALLQHGVEELPKHCRLTPGVPLKPMLAHPTRAVADLFTR
FENELFTCEWKYDGERAQIHVPGEETPQLDKAAIFSRNQENNTTKYPDVIGRLPSLLKDT
VKSCVLDCEAVAYDVEKKQILPFQILSTRKRKDAQESEIKVQVCIFVFDLLYYNGQALVK
LPLQERRQLLRDNFNEVEGTWQLARGRDCSNTEEVELELAEALRGSCEGLMVKALTGDKA
RYDIARRSHNWLKLKKDYLEGCGDSIDAVVIGAYEGRGKRAGRFGGFLLAAREPSADCYQ
TLCKIGTGFSDEQLTAFTEALKPHVISAPPSYYSYSSSVQPDVWLEPAAVWEVRCADLSL
SPAHRAALGRLERDRGVSLRFPRFIRVREDKTPEQATTAQQIVEMYLSQDQVKNTTRAAP
CEDDFY
NT seq 2721 nt   +upstreamnt  +downstreamnt
atgaactccttaaagtttcttacagtcagtagattagtatttggactccgttctgtgcct
gtttgtgcaggaaacgtaaacatctctcatttcgttaatgttcctaataaattagtaaat
tttgggactcaaaacatgtcgcagacaagtattagatcgttctttacagcaacacccaaa
aaaaatattgaaatcaaaaaggaggactccaaggataattcaataacagatgagaatgaa
tctccagttacaaatggaactgaaaagaaagcaaagagaataagatcagagagcagtggc
agtgattcagtggatgatgtgaaatctaacaaagttgatagtgctgaaaagaaaaagtca
aagcgcaggcgtattgtaagttcaggaagtgaatcagagacaaagtcagatacagaagaa
ataaaattggaaaaaagtgaaaaccctgttaaaacttatgattcaccgaaaagcaagaaa
actaaggcaaaagttctaaaagttgaatcaccagtaaaagttagtcctaaaaaggaatca
gtattttcaacacttaagagtcctaaagtcaaacaagagaaagaaagtccaaaagcgaag
aaggaagtcaaatctccaccttcaagtaaaaagaaaaataatgtgagcccatccagtaaa
aagaaagaagttcctgaagaaaataaagagaatgggatcaaagaggagaaacttgatatt
aaagctacattgactcctgaggctgattacaacccagcgaaatcaaaatacaatccaata
aacgatgcatgctggtcaaaaggaaaagaaatcccatatcttgctctggcaaaaacactt
gaagctatcgaagctacatcggccaggctgaaaatgattgagattttgagtaactacttc
agatctgtgattgtattgacaccagaagacctgttgccgagtatatacttgtgtttaaac
cagctagcaccagcttaccatagtcttgagttaggcatggcggaaacctacataatgaaa
gcggtagggcagtgcacggggcggtccctcgctcagatgcgcaccgcagcccgagctagc
ggagacctcgggctggtagcggagcaggcgcgcgccacacagcgcaccatgttcacgccc
gcgccgctcaccctgcgccgcgtgttcactgcgctcaaggaggtcgctgctgagagtggt
cacgcttcggtaaataagaaaataggcaagatacaatccctatatgtcgcatgtcgattc
tctgaagcaagatatcttataaggtcgctagaaggcaagctacgtataggtctggcggaa
caatcagtactacaagcgctcgcagtggcctgcgccgcgactccgcccgccggacctcgg
gccggagagatagacgtggctggtaaaatgagcgcggaacagtttaaggcgcgggtagac
gagtacgcactaacaataaaaacaacgtactgcgagtgtccgaactacgacacgctcgta
gcggcgttactgcagcacggtgtggaggaactgcccaagcattgccgtctcacgcccgga
gtgccgctcaagcccatgttggcgcaccccacgcgagctgtggccgatttgtttactcgg
ttcgagaacgagttattcacgtgcgaatggaagtacgacggtgagcgcgcacagatacac
gtgcccggcgaagagacgccgcaattagataaagcggccatcttcagcaggaaccaggag
aacaacactactaaatacccggatgtaattggccgtttgccctcgctactgaaagacaca
gtaaaaagttgcgtgttggactgcgaggcggtggcgtacgatgttgagaaaaaacaaatt
ctgcccttccagattttatcaacccgcaaacgcaaagatgcgcaagagtcagagatcaag
gtacaagtgtgtatattcgtgttcgatctgttgtactacaacggacaggcgctcgtcaaa
ctgccgctacaggagaggaggcagttgctgagggataactttaatgaggttgagggcaca
tggcagctagcgcgcggcagagactgctccaacacggaggaagtggagcttgagctagcg
gaagcattgcgcggctcgtgcgaggggctcatggtgaaagctctcaccggggataaagcc
cggtatgacatagcaaggcgctctcataattggctcaagttgaaaaaggactacctagag
ggttgcggggacagtatcgacgcggtggtgatcggcgcgtacgagggccgcggaaaacgt
gcgggacgcttcgggggcttcctgctcgctgcaagagaacccagtgcggactgctaccag
acattgtgcaagatcggcactgggtttagcgacgagcagctgactgctttcaccgaagcg
ttaaagccacacgttatctccgctccgcctagttactacagctactcgagcagcgtacag
ccggacgtgtggctggagccggcagcggtgtgggaggtgcggtgcgcggacctgtcgctg
tcgcccgcgcaccgcgccgcgctcggccgcctcgagcgggaccgcggcgtgtcgctgcgc
ttccccagattcatccgcgtgcgagaagacaagactccggagcaggcgacgacggcgcaa
caaatcgtagagatgtatctctcacaagatcaagttaagaataccacgagagccgcgccc
tgtgaagacgatttctactaa

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