Cariama cristata (Red-legged seriema): 104164886
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Entry
104164886 CDS
T08341
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri03022
Basal transcription factors
ccri03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104164886
09124 Replication and repair
03420 Nucleotide excision repair
104164886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccri03021
]
104164886
03400 DNA repair and recombination proteins [BR:
ccri03400
]
104164886
Transcription machinery [BR:
ccri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
104164886
DNA repair and recombination proteins [BR:
ccri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
104164886
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
IBR
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
104164886
NCBI-ProteinID:
XP_009702664
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MDDEPERTKRWEGGYERTWEILKEDESGSLKATIEDNLFKAKRKRLYEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGLIVTKSKRAEKMTEL
SGNSKKHITALKKAVDMNCSGEPSLYNSLSLAMQTLKHMPGHTSREVLIVFSSLTTCDPA
NIYDLIKCLKAVKIRVSVIGLSAEVRVCTVLARETGGTYRIILDESHYKELLMHHVSPPP
AGSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAQLENNSEPGLTLGGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEVPLEEYQGERYCQGCQGEMKDQNVYIC
KVCQNAFCMECDLFVHDSLHCCPGCIHEHPAPISV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgaacccgaacggaccaagcgctgggaaggaggctacgaaagaacatgggaa
attctgaaagaagatgaatccggatcgctgaaagcgaccatcgaggacaatcttttcaaa
gcaaagaggaaaagactctatgaacaccatggacaagttcgacttggaatgatgcgtcac
ctttacgtggttgttgatggatcaagaactatggaagaccaagatttaaaaccaaacaga
cttacttgcactttaaagttattggaatattttgttgaagagtactttgatcaaaatcct
attagtcagattggcttaattgtaactaagagtaaaagagctgaaaaaatgacagaactt
tcaggtaactcaaaaaagcacataactgctctgaagaaagcagtggatatgaactgcagt
ggagagccgtctctatataattccctaagtttggccatgcagactttgaagcatatgcca
ggacatacaagcagagaggtcttgatagtcttcagcagtctaacgacatgtgatccagcc
aacatctatgatctaattaagtgtttaaaagcagttaagatcagagtatctgtcatcggc
ctaagtgctgaagtccgagtttgtacagtacttgcccgagaaactggtggaacataccgc
attattttagatgaaagtcattataaggaactgctgatgcatcatgttagtcctccacct
gctggttcaagttctgagtgctcccttattcgaatgggttttcctcagcacactattgct
tctctatctgatcaagatgcaaaaccatcctttagcatggcgcaattggaaaacaacagt
gagcccggtcttacactgggtggatatttctgtccccagtgcagagccaaatactgtgaa
cttcctgtggaatgcaaaatctgtggtcttacattagtatctgcacctcacctggctcgg
tcttaccatcacttgtttcctttggatgcctttcaggaagttcccttggaagaatatcag
ggggaacggtattgtcaaggctgccagggagaaatgaaagatcaaaatgtttacatatgt
aaagtgtgtcagaatgcattttgcatggaatgtgatttgtttgttcatgattctctgcac
tgctgtcctggctgtattcacgagcaccctgctcccatatctgtatga
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integrated database retrieval system
